Correlation analysis of microsatellite DNA markers with body weight, length and height of common carp (Cyprinus carpioL.)

2008 ◽  
Vol 30 (5) ◽  
pp. 613-619 ◽  
Author(s):  
Yi-Feng ZHANG
1970 ◽  
Vol 14 ◽  
pp. 113-120 ◽  
Author(s):  
MAS Jewel ◽  
MM Rahman ◽  
MN Islam

Genetic variation of two strains (Scaled and Mirror) of six hatchery populations of common carp (Cyprinus carpio) was studied using three microsatellite loci (MFW13, MFW17 and MFW28). The loci were amplified by Polymerase Chain Reaction (PCR). The PCR products were electrophoresed on 6% polyacrylamide gel and the alleles were visualized by silver nitrate staining. All the three loci were found polymorphic. The average number of alleles was the highest in the population *SC-SMK (5.00) and lowest in **MC-SMK (4.00). Total number of null allele was more in mirror carp populations (6) than scaled carp populations (4). The average observed heterozygosity (Ho) ranged from 0.54 to 0.67. The average observed heterozygosity (Ho) was lower than the average expected heterozygosity (He) in case of all the populations. The population ***SC-BCH had high level of genetic variation in comparison to other five populations because this population had negative 1-Ho/He values in case of two loci out of three analyzed. The rest five populations had negative 1-Ho/He values only in one locus. In 6 of a total of 18 tests, significant deviations from Hardy-Weinberg expectations (HWE) were detected. Pairwise Fst values were used to detect the genetic distance between the pairs of populations. The Fst value was highest (0.153) between the population MC-AFF and MC-SMK. Nei’s genetic distance value was also highest (0.462) between these populations. The Fst value of 0.153 represents a high level of population differentiation. The lowest Fst value (0.001) was found between SC-SMK and MC-SMK. This value was statistically insignificant. *SC–SMK- scaled carp from Sagor Matsho Khamar **MC – SMK- mirror carp from Sagor Matsho Khamar ***SC-BCH- scaled carp from Brahmaputra Char Fishery Key words: Genetic variation, common carp, Microsatellite DNA markers J. bio-sci. 14: 113-120, 2006


2010 ◽  
Vol 34 (2) ◽  
pp. 169-177
Author(s):  
Fu-ping LIU ◽  
Jun-jie BAI ◽  
Hong-mei SONG ◽  
Xing YE ◽  
Sheng-jie LI ◽  
...  

2008 ◽  
Vol 8 (3) ◽  
pp. 679-682 ◽  
Author(s):  
Wu Xin-Sheng ◽  
Wu Tian-Wen ◽  
Zhao Hui-Ling ◽  
Cheng Guang-Long ◽  
Xu Qi ◽  
...  

Hydrobiologia ◽  
2005 ◽  
Vol 533 (1-3) ◽  
pp. 223-228 ◽  
Author(s):  
István Lehoczky ◽  
István Magyary ◽  
Csaba Hancz ◽  
Steven Weiss

2018 ◽  
Vol 51 ◽  
pp. 185-192
Author(s):  
S. Kruhlyk ◽  
V. Dzitsiuk ◽  
V. Spyrydonov

Genetic variability of domestic dogs is a source for effective process of breed formation and creating unique gene complexes. In the world, for preservation of genetic resources of dogs, there are dog training associations which have great confidence: American Club Dog Breeders (AKC), the British Kennel Club (KC) and the Federation Cynologique Internationale (FCI), aimed at protecting breeding dogs, standards creation, registration of a breed, and issuance of accurate pedigrees. Evaluation of the genetic diversity of dog breeds is able to significantly complement and improve their breeding programs. Since breeds of dog differ in morphological and economic characteristics, the problem of finding of the breed features in the genome of animals is becoming more topical. From this point of view, French Bulldog is an interesting breed of dog (FRANC.BULLDOGGE, FCI standard number 101) which belongs by the classification of breeds, adopted in FCI, to the group IX – a dog-companion for health and fun, but to a subgroup of fighting dogs of a small format. French Bulldog breed has been researched slightly not only in Ukraine and also abroad, as the main work of all dog association is focused on solving theoretical and practical issues of breeding, keeping, feeding, veterinary protection and others. The study was conducted at Research Department of Molecular Diagnostic Tests of Ukrainian Laboratory of Quality and Safety of Agricultural Products. 33 animals of French Bulldog breed, admitted to use in dog breeding of Ukrainian Kennel Union (UKU), were involved for the genetic analysis using DNA markers. The materials of the research were buccal epithelial cells, selected before the morning feeding of animals by scraping mucous membrane of oral cavity with disposable, dry, sterile cotton swab. Genomic DNA was extracted using KIT-set of reagents for DNA isolation according to the manufacturer's instructions. PEZ1, PEZ3, PEZ6, PEZ8, FHC 2010, FHC 2054 markers, recommended by International Society for Animal Genetics (ISAG), ACN, КC and FCI, were used for research. As a result of research 25 alleles for all the loci were detected in the experimental sample of dogs. The average number of alleles at the locus Na, obtained by direct counting, was 4.16. The most polymorphic loci for this breed were PEZ6 and PEZ3 with 8 and 6 allelic variants. Monomorphic loci were PEZ8 and FHC 2054 which had 4 and 3 alleles and the lowest level of polymorphism was observed for PEZ 1 and FHC 2010 loci in which only 2 alleles were identified. On analyzing the molecular genetic characteristics of dogs of French Bulldog breed, we found a high variability of genotype on rare alleles, which included alleles: M, C, D, E, J, K, L, O, N and representing 60% of the total number of the identified alleles. C, D, E alleles for PEZ3 locus and O allele at PEZ6 locus are unique to the sampling of dogs because they are not repeated in other loci. Typical alleles: N, F, R, I, P, K, M are 40% of the total. But F, R alleles for PEZ3 locus and P allele for locus PEZ6 are not repeated either in standard allelic variants or in rare one, indicating a high information content of these alleles and loci to be used for further monitoring of allele pool, genetic certification and identification of dogs. Microsatellite DNA loci were analyzed as a result of investigations of French Bulldogs and the most informative: PEZ3, PEZ6 and PEZ8 were found, which have high efficiency in individual and breed certification of dogs due to high variability. These data allow further monitoring of the state of genetic diversity of the breed and the development of measures for improvement of breeding to preserve the structure of breeding material. The study of individual and population genetic variability is advisable to continue for breeding of French Bulldogs "in purity" and preserving valuable gene complexes. The results are the basis for further monitoring of the proposed informative panels of microsatellite DNA markers for genotyping dog of French Bulldog breed and their complex evaluation.


2008 ◽  
Vol 16 (2) ◽  
pp. 156
Author(s):  
Liao Xinjun ◽  
Chang Hong ◽  
Zhang Guixiang ◽  
Wang Donglei ◽  
Song Weitao ◽  
...  

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