scholarly journals Optimization of DNA extraction from seeds and fresh leaf tissues of wild marigold (Tagetes minuta) for polymerase chain reaction analysis

2010 ◽  
Vol 9 (1) ◽  
pp. 386-393 ◽  
Author(s):  
I. Shahzadi ◽  
R. Ahmed ◽  
A. Hassan ◽  
M.M. Shah
2019 ◽  
Vol 12 (2) ◽  
pp. 45-48
Author(s):  
Shao-jie Liang ◽  
Ming-xia Chen ◽  
Chun-qi Gao ◽  
Hui-chao Yan ◽  
Guo-long Zhang ◽  
...  

Sex identification plays an important role in avian production. Hitherto, it is difficult to distinguish the sexes of monomorphic birds based on their external features. The chromo-helicase-DNA-binding genes contain CHD-W gene and CHD-Z gene, which are located on the W chromosome and Z chromosome, respectively. Since CHD-W gene is unique to females, the polymerase chain reaction can be used for sex identification. However, extracting DNA procedures for verifying the sex is tedious and expensive. To address these disadvantages, the objective of this study was to develop a simple DNA extraction assay to efficiently process blood, liver, and feather samples. The results showed that 2% dimethylsulfoxide was suitable for processing blood, and phosphate-buffered saline was suitable for processing liver and feather samples. The specific primers were designed, and the length of the targets is 474 bp on Z chromosome and 319 bp on W chromosome. The pigeons were identified as females based on the presence of two bands on the gel, and as males based on the presence of one band. Taken together, our results suggested that feather samples were more appropriate than blood or liver for sex identification of pigeons. Compared to the traditional DNA extraction, this method shortened the assay time and reduced the cost.


2014 ◽  
Vol 13 (3) ◽  
pp. 6070-6078 ◽  
Author(s):  
E.C.B. Silva ◽  
M.A. Pelinca ◽  
A.C. Acosta ◽  
D.M.F. Silva ◽  
M.A. Gomes Filho ◽  
...  

2005 ◽  
Vol 50 (6) ◽  
pp. 1117-1117 ◽  
Author(s):  
Jeanne Drisko ◽  
Bette Bischoff ◽  
Cheryl Giles ◽  
Martin E. Adelson ◽  
Raja-Venkitesh S. Rao ◽  
...  

2005 ◽  
Vol 50 (6) ◽  
pp. 1113-1117 ◽  
Author(s):  
Jeanne Drisko ◽  
Bette Bischoff ◽  
Cheryl Giles ◽  
Martin Adelson ◽  
Raja-Venkitesh S. Rao ◽  
...  

2012 ◽  
Vol 8 (5) ◽  
pp. 225-228 ◽  
Author(s):  
Saba Hasan ◽  
Jyoti Prakash ◽  
Abhinav Vashishtha ◽  
Agnivesh Sharma ◽  
Kuldeep Srivastava ◽  
...  

2017 ◽  
Vol 23 (1) ◽  
Author(s):  
N.NANDHA KUMAR ◽  
K. SOURIANATHA SUNDARAM ◽  
D. SUDHAKAR ◽  
K.K. KUMAR

Excessive presence of polysaccharides, polyphenol and secondary metabolites in banana plant affects the quality of DNA and it leads to difficult in isolating good quality of DNA. An optimized modified CTAB protocol for the isolation of high quality and quantity of DNA obtained from banana leaf tissues has been developed. In this protocol a slight increased salt (NaCl) concentration (2.0M) was used in the extraction buffer. Polyvinylpyrrolidone (PVP) and Octanol were used for the removal of polyphenols and polymerase chain reaction (PCR) inhibitors. Proteins like various enzymes were degraded by Proteinase K and removed by centrifugation from plant extract during the isolation process resulting in pure genomic DNA, ready to use in downstream applications including PCR, quantitative polymerase chain reaction (qPCR), ligation, restriction and sequencing. This protocol yielded a high molecular weight DNA isolated from polyphenols rich leaves of Musa spp which was free from contamination and colour. The average yields of total DNA from leaf ranged from 917.4 to 1860.9 ng/ìL. This modified CTAB protocol reported here is less time consuming 4-5h, reproducible and can be used for a broad spectrum of plant species which have polyphenol and polysaccharide compounds.


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