scholarly journals Supplementary material to "Technical Note: Relating functional group measurements to carbon types for improved model-measurement comparisons of organic aerosol composition"

2016 ◽  
Author(s):  
Satoshi Takahama ◽  
Giulia Ruggeri
Keyword(s):  
Functional Group ◽  
Organic Aerosol ◽  
Technical Note ◽  
Aerosol Composition ◽  
Supplementary Material ◽  
Improved Model ◽  
Model Measurement

scholarly journals Technical note: Relating functional group measurements to carbon types for improved model–measurement comparisons of organic aerosol composition

2017 ◽  
Vol 17 (7) ◽  
pp. 4433-4450 ◽  
Author(s):  
Satoshi Takahama ◽  
Giulia Ruggeri
Keyword(s):  
Organic Carbon ◽  
Functional Group ◽  
Organic Aerosol ◽  
Technical Note ◽  
Molecular Structures ◽  
Organic Carbon Content ◽  
Aerosol Composition ◽  
Ft Ir ◽  
Improved Model ◽  
Model Measurement

Abstract. Functional group (FG) analysis provides a means by which functionalization in organic aerosol can be attributed to the abundances of its underlying molecular structures. However, performing this attribution requires additional, unobserved details about the molecular mixture to provide constraints in the estimation process. We present an approach for conceptualizing FG measurements of organic aerosol in terms of its functionalized carbon atoms. This reformulation facilitates estimation of mass recovery and biases in popular carbon-centric metrics that describe the extent of functionalization (such as oxygen to carbon ratio, organic mass to organic carbon mass ratio, and mean carbon oxidation state) for any given set of molecules and FGs analyzed. Furthermore, this approach allows development of parameterizations to more precisely estimate the organic carbon content from measured FG abundance. We use simulated photooxidation products of α-pinene secondary organic aerosol previously reported by Ruggeri et al. (2016) and FG measurements by Fourier transform infrared (FT-IR) spectroscopy in chamber experiments by Sax et al. (2005) to infer the relationships among molecular composition, FG composition, and metrics of organic aerosol functionalization. We find that for this simulated system, ∼ 80 % of the carbon atoms should be detected by FGs for which calibration models are commonly developed, and ∼ 7 % of the carbon atoms are undetectable by FT-IR analysis because they are not associated with vibrational modes in the infrared. Estimated biases due to undetected carbon fraction for these simulations are used to make adjustments in these carbon-centric metrics such that model–measurement differences are framed in terms of unmeasured heteroatoms (e.g., in hydroperoxide and nitrate groups for the case studied in this demonstration). The formality of this method provides framework for extending FG analysis to not only model–measurement but also instrument intercomparisons in other chemical systems.

scholarly journals Technical Note: Relating functional group measurements to carbon types for improved model-measurement comparisons of organic aerosol composition

2016 ◽  
Author(s):  
Satoshi Takahama ◽  
Giulia Ruggeri
Keyword(s):  
Organic Carbon ◽  
Functional Group ◽  
Organic Aerosol ◽  
Chem Phys ◽  
Technical Note ◽  
Molecular Structures ◽  
Organic Carbon Content ◽  
Aerosol Composition ◽  
Ft Ir ◽  
Model Measurement

Abstract. Functional group (FG) analysis provides a means by which functionalization in organic aerosol can be attributed to the abundances of its underlying molecular structures. However, performing this attribution requires additional, unobserved details about the molecular mixture to provide constraints in the estimation process. To address this issue, we present an approach for conceptualizing FG measurements of organic aerosol in terms of its functionalized carbon atoms. This reformulation facilitates estimation of mass recovery and biases in popular carbon-centric metrics that describe the extent of functionalization (such as oxygen to carbon ratio, organic mass to organic carbon mass ratio, and mean carbon oxidation state) for any given set of molecules and FGs analyzed. Furthermore, this approach allows development of parameterizations to more precisely estimate the organic carbon content from measured FG abundance. We use simulated photooxidation products of α-pinene secondary organic aerosol previously reported by Ruggeri et al. (Atmos. Chem. Phys., 16, 4401–4422, 2016) and FG measurements by Fourier Transform Infrared (FT-IR) spectroscopy in chamber experiments by Sax et al. (Aerosol Sci. Tech., 39, 822–830, 2005) to infer the relationships among molecular composition, FG composition, and metrics of organic aerosol functionalization. We find that for this simulated system, ~ 80 % of the carbon atoms should be detected by FGs for which calibration models are commonly developed, and ~ 7 % of the carbon atoms are undetectable by FT-IR analysis because they are not associated with vibrational modes in the infrared. Estimated biases due to undetected carbon fraction for these simulations are used to make adjustments in these carbon-centric metrics such that model-measurement differences are framed in terms of unmeasured heteroatoms (e.g., in hydroperoxide and nitrate groups for the case studied in this demonstration). The formality of this method provides framework for extending FG analysis to not only model-measurement but also instrument intercomparisons in other chemical systems.

scholarly journals Determination of the biogenic secondary organic aerosol fraction in the boreal forest by NMR spectroscopy

2012 ◽  
Vol 12 (2) ◽  
pp. 941-959 ◽  
Author(s):  
E. Finessi ◽  
S. Decesari ◽  
M. Paglione ◽  
L. Giulianelli ◽  
C. Carbone ◽  
...  
Keyword(s):  
Nmr Spectroscopy ◽  
Boreal Forest ◽  
Functional Group ◽  
Secondary Organic Aerosol ◽  
Organic Aerosol ◽  
Spectroscopic Techniques ◽  
Aerosol Composition ◽  
Air Masses ◽  
The North ◽  
Aerosol Mass

Abstract. The study investigates the sources of fine organic aerosol (OA) in the boreal forest, based on measurements including both filter sampling (PM1) and online methods and carried out during a one-month campaign held in Hyytiälä, Finland, in spring 2007. Two aerosol mass spectrometers (Q-AMS, ToF-AMS) were employed to measure on-line concentrations of major non-refractory aerosol species, while the water extracts of the filter samples were analyzed by nuclear magnetic resonance (NMR) spectroscopy for organic functional group characterization of the polar organic fraction of the aerosol. AMS and NMR spectra were processed separately by non-negative factorization algorithms, in order to apportion the main components underlying the submicrometer organic aerosol composition and depict them in terms of both mass fragmentation patterns and functional group compositions. The NMR results supported the AMS speciation of oxidized organic aerosol (OOA) into two main fractions, which could be generally labelled as more and less oxidized organics. The more oxidized component was characterized by a mass spectrum dominated by the m/z 44 peak, and in parallel by a NMR spectrum showing aromatic and aliphatic backbones highly substituted with oxygenated functional groups (carbonyls/carboxyls and hydroxyls). Such component, contributing on average 50% of the OA mass throughout the observing period, was associated with pollution outbreaks from the Central Europe. The less oxidized component was enhanced in concomitance with air masses originating from the North-to-West sector, in agreement with previous investigations conducted at this site. NMR factor analysis was able to separate two distinct components under the less oxidized fraction of OA. One of these NMR-factors was associated with the formation of terrestrial biogenic secondary organic aerosol (BSOA), based on the comparison with spectral profiles obtained from laboratory experiments of terpenes photo-oxidation. The second NMR factor associated with western air masses was linked to biogenic marine sources, and was enriched in low-molecular weight aliphatic amines. Such findings provide evidence of at least two independent sources originating biogenic organic aerosols in Hyytiälä by oxidation and condensation mechanisms: reactive terpenes emitted by the boreal forest and compounds of marine origin, with the latter relatively more important when predominantly polar air masses reach the site. This study is an example of how spectroscopic techniques, such as proton NMR, can add functional group specificity for certain chemical features (like aromatics) of OA with respect to AMS. They can therefore be profitably exploited to complement aerosol mass spectrometric measurements in organic source apportionment studies.

scholarly journals Technical Note: Development of chemoinformatic tools to enumerate functional groups in molecules for organic aerosol characterization

2016 ◽  
Vol 16 (7) ◽  
pp. 4401-4422 ◽  
Author(s):  
Giulia Ruggeri ◽  
Satoshi Takahama
Keyword(s):  
Functional Groups ◽  
Chemical Speciation ◽  
Organic Aerosol ◽  
Technical Note ◽  
Carbon Oxidation ◽  
Estimation Model ◽  
Aerosol Composition ◽  
Reduced Representation ◽  
Complete Set ◽  
Chamber Studies

Abstract. Functional groups (FGs) can be used as a reduced representation of organic aerosol composition in both ambient and controlled chamber studies, as they retain a certain chemical specificity. Furthermore, FG composition has been informative for source apportionment, and various models based on a group contribution framework have been developed to calculate physicochemical properties of organic compounds. In this work, we provide a set of validated chemoinformatic patterns that correspond to (1) a complete set of functional groups that can entirely describe the molecules comprised in the α-pinene and 1,3,5-trimethylbenzene MCMv3.2 oxidation schemes, (2) FGs that are measurable by Fourier transform infrared spectroscopy (FTIR), (3) groups incorporated in the SIMPOL.1 vapor pressure estimation model, and (4) bonds necessary for the calculation of carbon oxidation state. We also provide example applications for this set of patterns. We compare available aerosol composition reported by chemical speciation measurements and FTIR for different emission sources, and calculate the FG contribution to the O : C ratio of simulated gas-phase composition generated from α-pinene photooxidation (using the MCMv3.2 oxidation scheme).

scholarly journals Biogenic oxidized organic functional groups in aerosol particles from a mountain forest site and their similarities to laboratory chamber products

2010 ◽  
Vol 10 (2) ◽  
pp. 4789-4822 ◽  
Author(s):  
R. E. Schwartz ◽  
L. M. Russell ◽  
S. J. Sjosted ◽  
A. Vlasenko ◽  
J. G. Slowik ◽  
...  
Keyword(s):  
Carboxylic Acid ◽  
Functional Groups ◽  
Functional Group ◽  
Group Composition ◽  
Organic Aerosol ◽  
Anthropogenic Sources ◽  
Forest Site ◽  
Aerosol Composition ◽  
X Ray ◽  
Organic Functional Groups

Abstract. Submicron particles collected at Whistler, British Columbia, at 1020 masl during May and June 2008 on Teflon filters were analyzed by Fourier transform infrared (FTIR) and X-ray fluorescence (XRF) techniques for organic functional groups (OFG) and elemental composition. Organic mass (OM) ranged from less than 0.5 to 3.1μg m−3, with a project mean and standard deviation of 1.3±1.0 μg m−3 and 0.21±0.16 μg m−3 for OM and sulfate, respectively. On average, organic hydroxyl, alkane, and carboxylic acid groups represented 34%, 33%, and 23% of OM, respectively. Ketone, amine and organosulfate groups constituted 6%, 5%, and <1% of the average organic aerosol composition, respectively. Measurements of volatile organic compounds (VOC), including isoprene and monoterpenes from biogenic VOC (BVOC) emissions and their oxidation products (methyl-vinylketone/methacrolein, MVK/MACR), were made using co-located proton transfer reaction mass spectrometry (PTR-MS). We present chemically-specific evidence of OFG associated with BVOC emissions. Positive matrix factorization (PMF) analysis attributed 65% of the campaign OM to biogenic sources, based on the correlations of one factor to monoterpenes and MVK/MACR. The remaining fraction was attributed to anthropogenic sources based on a correlation to sulfate. The functional group composition of the biogenic factor (consisting of 32% alkane, 25% carboxylic acid, 2% organic hydroxyl, 16% ketone, and 6% amine groups) was similar to that of secondary organic aerosol (SOA) reported from the oxidation of BVOCs in laboratory chamber studies, providing evidence that the magnitude and chemical composition of biogenic SOA simulated in the laboratory is similar to that found in actual atmospheric conditions. The biogenic factor OM is also correlated to dust elements, indicating that dust may act as a non-acidic SOA sink. This role is supported by the organic functional group composition and morphology of single particles, which were analyzed by scanning transmission X-ray microscopy near edge X-ray absorption fine structure (STXM-NEXAFS).

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