scholarly journals Supplementary material to "Major role of ammonia-oxidizing bacteria in N<sub>2</sub>O production in the Pearl River Estuary"

Author(s):  
Li Ma ◽  
Hua Lin ◽  
Xiabing Xie ◽  
Minhan Dai ◽  
Yao Zhang
2021 ◽  
Vol 8 ◽  
Author(s):  
Li Ma ◽  
Shangjin Tan ◽  
Hongbin Liu ◽  
Shuh-Ji Kao ◽  
Minhan Dai ◽  
...  

To distinguish between the distribution and activity of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) in the Pearl River estuary (PRE), we investigated the DNA- and cDNA-based β-proteobacterial and archaeal amoA genes on three size-fractionated particles of &gt;3.0 μm, 0.45–3.0 μm, and 0.22–0.45 μm. Results showed that AOB were more abundant in the freshwater with high concentrations of ammonium (NH4+) and low dissolved oxygen, whereas AOA were dominant in the NH4+-depleted seawater and sensitive to temperature. Obvious shifts in ammonia-oxidizing communities were found along the salinity gradient in the PRE. AOB clearly presented a particle-associated nature, as evidenced by higher relative abundance of amoA genes attached to the large particles (&gt;3.0 μm) and their transcripts exclusively detected on this fraction. Moreover, higher transcriptional activity (indicated by the cDNA/DNA ratio) of AOB on the large particles, suggesting AOB were actively involved in ammonia oxidation despite their lower abundance in the mid- and lower estuarine regions. In contrast, AOA exhibited higher transcriptional activity on the 0.45–3.0 μm and 0.22–0.45 μm particles, implying the free-living strategy of these microbes. Together, these findings from field observations provide useful information on the ecological strategies of ammonia-oxidizing communities in response to different environmental conditions.


2019 ◽  
Vol 29 (4) ◽  
pp. 861-875
Author(s):  
Zeyu Zeng ◽  
William W. L. Cheung ◽  
Shiyu Li ◽  
Jiatang Hu ◽  
Ying Wang

2021 ◽  
Vol 9 (2) ◽  
pp. 131
Author(s):  
Dongliang Wang ◽  
Lijun Yao ◽  
Jing Yu ◽  
Pimao Chen

The Pearl River Estuary (PRE) is one of the major fishing grounds for the squid Uroteuthis chinensis. Taking that into consideration, this study analyzes the environmental effects on the spatiotemporal variability of U. chinensis in the PRE, on the basis of the Generalized Additive Model (GAM) and Clustering Fishing Tactics (CFT), using satellite and in situ observations. Results show that 63.1% of the total variation in U. chinensis Catch Per Unit Effort (CPUE) in the PRE could be explained by looking into outside factors. The most important one was the interaction of sea surface temperature (SST) and month, with a contribution of 26.7%, followed by the interaction effect of depth and month, fishermen’s fishing tactics, sea surface salinity (SSS), chlorophyll a concentration (Chl a), and year, with contributions of 12.8%, 8.5%, 7.7%, 4.0%, and 3.1%, respectively. In summary, U. chinensis in the PRE was mainly distributed over areas with an SST of 22–29 °C, SSS of 32.5–34‰, Chl a of 0–0.3 mg × m−3, and water depth of 40–140 m. The distribution of U. chinensis in the PRE was affected by the western Guangdong coastal current, distribution of marine primary productivity, and variation of habitat conditions. Lower stock of U. chinensis in the PRE was connected with La Niña in 2008.


Harmful Algae ◽  
2012 ◽  
Vol 13 ◽  
pp. 10-19 ◽  
Author(s):  
Ping-Ping Shen ◽  
Ya-Nan Li ◽  
Yu-Zao Qi ◽  
Lv-Ping Zhang ◽  
Ye-Hui Tan ◽  
...  

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