Soil-borne fungi belonging to the genus Rhizoctonia are considered to be
among the most destructive sugar beet pathogens. Although multinucleate R.
solani AG-2-2 is frequently detected as the main causal agent of root rot of
sugar beet worldwide, several binucleate (AG-A, AG-E and AG-K) and
multinucleate Rhizoctonia (R. solani AG-4, AG-5 and AG-8) have also been
included in the disease complex. Due to their soil-borne nature and wide
host range, the management of Rhizoctonia root rot of sugar beet is highly
demanding. Identification of Rhizoctonia AG associated with root rot of
sugar beet is the essential first step in determining a successful disease
management strategy. In this paper we report a highly specific and sensitive
real-time PCR protocol for detection of R. solani AG-2-2 which showed a high
level of specificity after testing against 10 different anastomosis groups
and subgroups, including AG-2-1 as the most closely related. Moreover, a
similar conventional PCR assay showed the same specificity but proved to be
at least a 100 times less sensitive. Future research will include further
testing and adaptation of this protocol for direct detection and
quantification of R. solani AG-2-2 in different substrates, including plant
tissue and soil samples.