scholarly journals Identification and characterization of virulence factor of several Indonesian Xanthomonas oryzae pv. oryzae

2014 ◽  
Vol 8 (3) ◽  
pp. 103-111
Author(s):  
FATIMAH FATIMAH ◽  
◽  
APON ZAENAL MUSTOPA ◽  
IQBAL KUSNANDARSYAH
Keyword(s):  
Virulence Factor ◽  
Xanthomonas Oryzae ◽  
Identification And Characterization

Identification and Characterization of a Novel Meningococcal Autotransporter Protein: A New Virulence Factor?

2001 ◽  
Vol 101 (s45) ◽  
pp. 18P-19P
Author(s):  
DPJ Turner ◽  
KG Wooldridge ◽  
Daa Ala'aldeen
Keyword(s):  
Virulence Factor ◽  
Protein A ◽  
Identification And Characterization

Identification and characterization of rice circular RNAs responding to Xanthomonas oryzae pv. oryzae invasion

2021 ◽  
Author(s):  
Peihong Wang ◽  
Sai Wang ◽  
Yan Wu ◽  
Wenhan Nie ◽  
Ayizekeranmu Yiming ◽  
...  
Keyword(s):  
Molecular Mechanisms ◽  
Enrichment Analysis ◽  
Xanthomonas Oryzae ◽  
Pcr Analysis ◽  
Circular Rnas ◽  
Transcriptional Gene Regulation ◽  
Identification And Characterization ◽  
Host Genes

Emerging role of circular RNAs (circRNAs) in various biological processes have advanced our knowledge of transcriptional and post-transcriptional gene regulation. To date, no research has been conducted to explore their roles in the rice- Xanthomonas oryzae pv. oryzae (Xoo) interaction. Therefore, we identified 3517 circRNAs from the highly virulent Xoo strain PXO99A-infected rice leaves using the ribosomal RNA (rRNA) depleted RNA-sequencing technique coupled with the CIRI2 and CIRCexplorer2 pipeline. Characterization analyses showed that these circRNAs were distributed across the whole genome of rice, and most circRNAs arised from exons (85.13 %), ranged from 200 bp to 1000 bp and were with a non-canonical GT/AG (including CT/AC equivalent) splicing signal. Functional annotation and enrichment analysis of the host genes that produced the DEcircRNAs suggested that these identified circRNAs might play an important role in reprogramming rice responses to PXO99A invasion, mainly by mediating photorespiration, chloroplast, peroxisome and diterpenoid biosynthesis. Moreover, 31 differentially expressed circRNAs (DEcircRNAs) were predicted to act as miRNA decoys in rice. The expression profile of 4 DEcircRNAs were validated by RT-qPCR with divergent primers, and the back-splicing sites of seven DEcircRNAs were verified by PCR analysis and Sanger sequencing. Collectively, these results inferred a potential functional role of circRNAs in the regulation of rice immunity and provide novel clues for revealing the molecular mechanisms of rice-PXO99A interaction.

Identification and characterization of five new OP2-related Myoviridae bacteriophages infecting different strains of Xanthomonas oryzae pv. oryzae

2018 ◽  
Vol 101 (2) ◽  
pp. 263-273 ◽  
Author(s):  
Solabomi Olaitan Ogunyemi ◽  
Jie Chen ◽  
Muchen Zhang ◽  
Li Wang ◽  
Md. Mahidul Islam Masum ◽  
...  
Keyword(s):  
Xanthomonas Oryzae ◽  
Different Strains ◽  
Identification And Characterization

scholarly journals Identification and Characterization of msf, a Novel Virulence Factor in Haemophilus influenzae

PLoS ONE ◽  
2016 ◽  
Vol 11 (3) ◽  
pp. e0149891 ◽  
Author(s):  
Jennifer M. Kress-Bennett ◽  
N. Luisa Hiller ◽  
Rory A. Eutsey ◽  
Evan Powell ◽  
Mark J. Longwell ◽  
...  
Keyword(s):  
Haemophilus Influenzae ◽  
Virulence Factor ◽  
Identification And Characterization
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