Variants of derivation modes for which catalytic P systems with one catalyst are computationally complete

Catalytic P systems are among the first variants of membrane systems ever considered in this area. This variant of systems also features some prominent computational complexity questions, and in particular the problem of using only one catalyst: is one catalyst enough to allow for generating all recursively enumerable sets of multisets? Several additional ingredients have been shown to be sufficient for obtaining even computational completeness with only one catalyst. Last year we could show that the derivation mode $$max_{objects}$$ m a x objects , where we only take those multisets of rules which affect the maximal number of objects in the underlying configuration one catalyst is sufficient for obtaining computational completeness without any other ingredients. In this paper we follow this way of research and show that one catalyst is also sufficient for obtaining computational completeness when using specific variants of derivation modes based on non-extendable multisets of rules: we only take those non-extendable multisets whose application yields the maximal number of generated objects or else those non-extendable multisets whose application yields the maximal difference in the number of objects between the newly generated configuration and the current configuration. A similar computational completeness result can even be obtained when omitting the condition of non-extendability of the applied multisets when taking the maximal difference of objects or the maximal number of generated objects. Moreover, we reconsider simple P system with energy control—both symbol and rule energy-controlled P systems equipped with these new variants of derivation modes yield computational completeness.

Improved Descriptional Complexity Results for Simple Semi-Conditional Grammars

A simple semi-conditional (SSC) grammar is a form of regulated rewriting system where the derivations are controlled either by a permitting string alone or by a forbidden string alone and this condition is specified in the rule. The maximum length i (j, resp.) of the permitting (forbidden, resp.) strings serves as a measure of descriptional complexity known as the degree of such grammars. In addition to the degree, the numbers of nonterminals and of conditional rules are also counted into the descriptional complexity measures of these grammars. We improve on some previously obtained results on the computational completeness of SSC grammars by minimizing the number of nonterminals and / or the number of conditional rules for a given degree (i, j). More specifically we prove, using a refined analysis of a normal form for type-0 grammars due to Geffert, that every recursively enumerable language is generated by an SSC grammar of (i) degree (2, 1) with eight conditional rules and nine nonterminals, (ii) degree (3, 1) with seven conditional rules and seven nonterminals (iii) degree (4, 1) with six conditional rules and seven nonterminals and (iv) degree (4, 1) with eight conditional rules and six nonterminals.

When catalytic P systems with one catalyst can be computationally complete

Catalytic P systems are among the first variants of membrane systems ever considered in this area. This variant of systems also features some prominent computational complexity questions, and in particular the problem of using only one catalyst in the whole system: is one catalyst enough to allow for generating all recursively enumerable sets of multisets? Several additional ingredients have been shown to be sufficient for obtaining computational completeness even with only one catalyst. In this paper, we show that one catalyst is sufficient for obtaining computational completeness if either catalytic rules have weak priority over non-catalytic rules or else instead of the standard maximally parallel derivation mode, we use the derivation mode maxobjects, i.e., we only take those multisets of rules which affect the maximal number of objects in the underlying configuration.

Adding Matrix Control: Insertion-Deletion Systems with Substitutions III

Insertion-deletion systems have been introduced as a formalism to model operations that find their counterparts in ideas of bio-computing, more specifically, when using DNA or RNA strings and biological mechanisms that work on these strings. So-called matrix control has been introduced to insertion-deletion systems in order to enable writing short program fragments. We discuss substitutions as a further type of operation, added to matrix insertion-deletion systems. For such systems, we additionally discuss the effect of appearance checking. This way, we obtain new characterizations of the family of context-sensitive and the family of recursively enumerable languages. Not much context is needed for systems with appearance checking to reach computational completeness. This also suggests that bio-computers may run rather traditionally written programs, as our simulations also show how Turing machines, like any other computational device, can be simulated by certain matrix insertion-deletion-substitution systems.

P systems with limited number of objects

P systems are a model of compartmentalized multiset rewriting inspired by the structure of living cells and the way they function. In this paper, we focus of a variant in P systems in which membranes have limited capacity, i.e., the number of objects they may hold is limited by a fixed bound. This feature corresponds to an important physical property of cellular compartments. We propose several possible semantics of limited capacity and show that one of them allows real-time simulations of partially blind register machines, while the other one allows for obtaining computational completeness.

Variants of Networks of Evolutionary Processors with Polarizations and a Small Number of Processors

We improve previous results obtained for networks of evolutionary processors — using the operations insertion, deletion, and substitution on strings — with elementary polarizations [Formula: see text] by showing that only seven processors are needed to obtain computational completeness. In the case of not requiring a special output node, only five processors are shown to be sufficient. We also prove that if the communication structure is allowed to be a directed graph without self-loops, then two polarizations are sufficient (with 12 or 17 nodes, depending on the definition). Moreover, we consider the case of not restricting the number of polarizations, thus obtaining the minimal number of three nodes for hybrid systems and even only one node where all three operations can be carried out.