¿Una ardilla que vuela?

En una noche oscura en un bosque, escuchamos ruidos en los árboles, algunas ramas se han movido. De pronto vemos una pequeña silueta surcar el cielo: “no es un ave, no es un avión, no es Superman, es ¡Glaucomys volans, la ardilla voladora!”.

A de novo genome assembly and annotation of the southern flying squirrel (Glaucomys volans)

Northern (Glaucomys sabrinus) and southern (Glaucomys volans) flying squirrels are widespread species distributed across North America. Northern flying squirrels are common inhabitants of the boreal forest, also occurring in coniferous forest remnants farther south, whereas the southern flying squirrel range is centered in eastern temperate woodlands. These two flying squirrel species exhibit a hybrid zone across a latitudinal gradient in an area of recent secondary contact. Glaucomys hybrid offspring are viable and can successfully backcross with either parental species, however, the fitness implications of such events are currently unknown. Some populations of G. sabrinus are endangered, and thus, interspecific hybridization is a key conservation concern in flying squirrels. To provide a resource for future studies to evaluate hybridization and possible introgression, we sequenced and assembled a de novo long-read genome from a G. volans individual sampled in southern Ontario, Canada, while four short-read genomes (two G. sabrinus and two G. volans, all from Ontario) were resequenced on Illumina platforms. The final genome assembly consisted of approximately 2.40 Gb with a scaffold N50 of 455.26 Kb. benchmarking universal single-copy orthologs reconstructed 3742 (91.2%) complete mammalian genes and genome annotation using RNA-Seq identified the locations of 19,124 protein-coding genes. The four short-read individuals were aligned to our reference genome to investigate the demographic history of the two species. A principal component analysis clearly separated resequenced individuals, while inferring population size history using the pairwise sequentially Markovian coalescent model noted an approximate species split 1 million years ago, and a single, possibly recently introgressed individual.

A de novo genome assembly and annotation of the southern flying squirrel (Glaucomys volans)

Northern (Glaucomys sabrinus) and southern (Glaucomys volans) flying squirrels are widespread species distributed across much of North America. Northern flying squirrels are common inhabitants of the boreal forest, also occurring in coniferous forest remnants farther south, whereas the southern flying squirrel range is centered in eastern temperate woodlands. These two flying squirrel species exhibit a hybrid zone across a latitudinal gradient in an area of recent secondary contact. Glaucomys hybrid offspring are viable and can successfully backcross with either parental species, however, the fitness implications of such events are currently unknown. Some populations of G. sabrinus are endangered, and thus, interspecific hybridization is a key conservation concern in flying squirrels. We sequenced and assembled a de novo long-read genome from a G. volans individual sampled in southern Ontario, Canada, while four short-read genomes (2 G. sabrinus and 2 G. volans, all from Ontario) were re-sequenced on Illumina platforms. The final genome assembly consisted of approximately 2.40Gb with a scaffold N50 of 455.26Kb. Benchmarking Universal Single-Copy Orthologs reconstructed 3,742 (91.2%) complete mammalian genes, and genome annotation using RNA-seq identified the locations of 19,124 protein-coding genes. The four short-read individuals were aligned to our reference genome to investigate the demographic history of the two species. A Principal Component Analysis clearly separated re-sequenced individuals, while inferring population size history using the Pairwise Sequentially Markovian Coalescent model noted an approximate species split one million years ago, and a single, possibly recently introgressed individual.

High Prevalence of Borrelia mayonii (Spirochaetales: Spirochaetaceae) in Field-Caught Tamias striatus (Rodentia: Sciuridae) From Northern Wisconsin

Borrelia mayonii is a recently discovered bacterial spirochete that causes Lyme disease and is transmitted by the blacklegged tick, Ixodes scapularis Say (Acari: Ixodidae). To date, B. mayonii has been isolated from two vertebrate host species in Minnesota: field-caught white-footed mice (Peromyscus leucopus Rafinesque; Rodentia: Cricetidae) and American red squirrel (Tamiasciurus hudsonicus Erxleben). Here, we describe the first detection of B. mayonii in field-caught eastern chipmunks (Tamias striatus L. (Rodentia: Cricetidae)) from northern Wisconsin. During our study, we captured 530 unique small mammals and found an infection prevalence of 23.50% in field-caught eastern chipmunks (4/17) and 1.19% in Peromyscus spp. (5/420). Mean larval and nymphal burdens were determined for captured Blarina brevicauda (0, 0), Glaucomys volans (0.29, 0.14), Myodes gapperi (0.27, 0), Napaeozapus insignis (0, 0.25), Peromyscus spp. (1.88, 0.11), T. striatus (1.06, 0.65), and Sorex cinereus (0.09, 0). The high B. mayonii infection prevalence in eastern chipmunks suggests that the species may be an important reservoir for B. mayonii in the Upper Midwest.

Ultrasonic Acoustic Surveys of State Endangered Northern Flying Squirrels in the Pocono Mountains, Pennsylvania

Surveying for flying squirrels by using traditional techniques produces extremely low detection rates compared with ultrasonic acoustics. Within Pennsylvania, the northern flying squirrel subspecies Glaucomys sabrinus macrotis is state listed as endangered due to habitat loss and parasite-mediated competition by and hybridization with the southern flying squirrel Glaucomys volans. This subspecies is isolated from adjacent populations in West Virginia and New York and has experienced drastic population declines. The discovery and characterization of ultrasonic vocalizations of G. s. macrotis and G. volans, as well as successful field surveys with ultrasonic acoustic detectors in the southern Appalachian Mountains, highlight the potential use of this technique for determining the presence of G. s. macrotis. To confirm the feasibility of using this technique on declining populations of G. s. macrotis sympatric with G. volans, we conducted 108 nights of passive ultrasonic acoustic surveys for G. s. macrotis at six survey sites by using two detectors per survey site (N = 12 detectors) in June 2017. We considered sites high quality (“high”) or low quality (“low”) based on the number of physical capture records during the past 2 decades and the dominance of boreo-montane conifer tree species in the overstory. We detected G. s. macrotis at four study sites and G. volans at all six study sites. We found higher average probability of detection for G. s. macrotis in high vs. low sites (0.28 ± 0.06 [mean ± SE] and 0.09 ± 0.07, respectively), whereas probability of detection was similar for G. volans between high and low sites (0.13 ± 0.05 and 0.17 ± 0.05, respectively). We also found G. s. macrotis had lower latency of detection at high vs. low sites (2.7 ± 0.8 and 7.83 ± 1.5 nights, respectively) but G. volans did not vary in latency of detection between sites (5 ± 1.6 and 3.8 ± 1.5 nights, respectively). Our study shows acoustics can be successfully used to efficiently survey G. s. macrotis in Pennsylvania, where populations are small and monitoring these populations more effectively is critical to determining changes in persistence due to climate- and disease-induced factors.

LAS ARDILLAS DE NICARAGUA (RODENTIA, SCIURIDAE)

ResumenActualizamos el conocimiento de la riqueza, distribución y taxonomía de las ardillas nicaragüenses, con tres géneros y seis especies: Glaucomys volans, Microsciurus alfari, Sciurus deppei, Sciurus granatensis, Sciurus richmondi y Sciurus variegatoides. Una es típica del bosque de coníferas del norte, G. volans; S. deppei de las montañas del norte y el Caribe; tres son propias del bosque Caribeño, M. alfari, S. granatensis y S. richmondi; y S. variegatoides se distribuye en todo el país con seis subespecies: S.variegatoides dorsalis del Pacífico y zona central; S. variegatoides adolphei del noroeste; S. variegatoides underwoodi y S. variegatoides boothiae del norte; S. variegatoides belti y S. variegatoides thomasi del Caribe. Son endémicas, S. richmondi y la subespecie S. variegatoides adolphei. Microsciurus alfari y S. granatensis presentan su límite norte en el sureste y G. volans presenta su límite sur en el norte. La lista roja nacional enlista tres especies en riesgo: S. richmondi y G. volans en peligro de extinción y M. alfari como amenazada; a nivel mundial se cataloga a S. richmondi como casi amenazada.Palabras clave: amenazado, endémico, Microsciurus alfari, Glaucomys volans, Sciurus deppei, S. granatensis, S. richmondi, S. variegatoides.AbstractThe updated richness, taxonomy, and distribution of Nicaraguan squirrels includes three genera and six species: Glaucomys volans, Microsciurus alfari, Sciurus deppei, Sciurus granatensis, Sciurus richmondi and Sciurus variegatoides. Glaucomys volans is typical of northern pine forest; S. deppei of northen mountains and Caribbean forest; three are restricted to Caribbean forest, M. alfari, S. granatensis and S. richmondi; whereas S. variegatoides is found throughout Nicaragua with six subespecies: S. variegatoides dorsalis pacific and central zone; S. variegatoides adolphei northeast; S. variegatoides underwoodi y S. variegatoides boothiae north; S. variegatoides belti and S. variegatoides thomasi is found on Caribbean slope. Sciurus richmondi and the subspecies S. variegatoides adolphei are endemic to Nicaragua. Microsciurus alfari and S. granatensis have their northernmost distributional limit in Southeastern Nicaragua, while the southern limit G. volans is in Northern Nicaragua. The Nicaraguan red list contains: S. richmondi and G. volans as endangered and M. alfari and S. richmondi as near endangered.Key words: endemic, endangered, Microsciurus alfari, Glaucomys volans, Sciurus deppei, S. granatensis, S. richmondi, S. variegatoides.

Corticosteroid-binding globulin levels in North American sciurids: implications for the flying squirrel stress axis

Corticosteroid-binding globulin (CBG) helps to regulate tissue bioavailability of circulating glucocorticoids (GCs), and in most vertebrates, ≥80%–90% of GCs bind to this protein. New World flying squirrels have higher plasma total cortisol levels (the primary corticosteroid in sciurids) than most vertebrates. Recent research suggests that flying squirrels have either low amounts of CBG or CBG molecules that have a low binding affinity for cortisol, as this taxon appears to exhibit very low proportions of cortisol bound to CBG. To test whether CBG levels have been adjusted over evolutionary time, we assessed the levels of this protein in the plasma of northern (Glaucomys sabrinus (Shaw, 1801)) and southern (Glaucomys volans (Linnaeus, 1758)) flying squirrels using immunoblotting, and compared the relative levels among three phylogenetically related species of sciurids. We also compared the pattern of CBG levels with cortisol levels for the same individuals. Flying squirrels had higher cortisol levels than the other species, but similar levels of CBG to their closest relatives (tree squirrels). We conclude that CBG levels in flying squirrels have not been adjusted over evolutionary time, and thus, the uncoupling of CBG levels from cortisol concentrations may represent an evolutionary modification in the lineage leading to New World flying squirrels.