Spatial distribution of Echinolitorina peruviana (Lamarck, 1882) for intertidal rocky shore in Antofagasta (23° S, Chile).

The intertidal rocky shores in continental Chile have high species diversity mainly in northern Chile (18-27° S), and one of the most widespread species is the gastropod Echinolittorina peruviana (Lamarck, 1822). The aim of the present study is do a first characterization of spatial distribution of E. peruviana in along rocky shore in Antofagasta town in northern Chile. Individuals were counted in nine different sites that also were determined their spectral properties using remote sensing techniques (LANDSAT ETM+). The results revealed that sites without marked human intervention have more abundant in comparison to sites located in the town, also in all studied sites was found an aggregated pattern, and in six of these sites were found a negative binomial distribution. The low density related to sites with human intervention is supported when spectral properties for sites were included. These results would agree with other similar results for rocky shore in northern and southern Chile.

Habitat selection and foraging site fidelity in Caspian Terns (Hydroprogne caspia) breeding in the Baltic Sea

Habitat preferences and foraging strategies affect population-level space use and are therefore crucial to understanding population change and implementing spatial conservation and management actions. We investigated the breeding season habitat preference and foraging site fidelity of the under-studied and threatened, Baltic Sea population of Caspian Terns (Hydroprogne caspia). Using GPS devices, we tracked 20 adult individuals at two breeding colonies, in Sweden and Finland, from late incubation through chick-rearing. Analyzing foraging movements during this period, we describe trip characteristics for each colony, daily metrics of effort, habitat use, and foraging site fidelity. We found that daily time spent away from the colony increased throughout the season, with colony-level differences in terms of distance travelled per day. In general, terns selected shallow waters between 0–5 meters in depth with certain individuals using inland lakes for foraging. We show, for the first time, that individual Caspian Terns are faithful to foraging sites throughout the breeding season, and that individuals are highly repeatable in their strategies regarding foraging site fidelity. These results fill important knowledge gaps for this at-risk population, and extend our general knowledge of the breeding season foraging ecology of this widespread species.

Growth and Wood Trait Relationships of Alnus glutinosa in Peatland Forest Stands With Contrasting Water Regimes

Human-driven peatland drainage has occurred in Europe for centuries, causing habitat degradation and leading to the emission of greenhouse gases. As such, in the last decades, there has been an increase in policies aiming at restoring these habitats through rewetting. Alder (Alnus glutinosa L.) is a widespread species in temperate forest peatlands with a seemingly high waterlogging tolerance. Yet, little is known about its specific response in growth and wood traits relevant for tree functioning when dealing with changing water table levels. In this study, we investigated the effects of rewetting and extreme flooding on alder growth and wood traits in a peatland forest in northern Germany. We took increment cores from several trees at a drained and a rewetted stand and analyzed changes in ring width, wood density, and xylem anatomical traits related to the hydraulic functioning, growth, and mechanical support for the period 1994–2018. This period included both the rewetting action and an extreme flooding event. We additionally used climate-growth and climate-density correlations to identify the stand-specific responses to climatic conditions. Our results showed that alder growth declined after an extreme flooding in the rewetted stand, whereas the opposite occurred in the drained stand. These changes were accompanied by changes in wood traits related to growth (i.e., number of vessels), but not in wood density and hydraulic-related traits. We found poor climate-growth and climate-density correlations, indicating that water table fluctuations have a stronger effect than climate on alder growth. Our results show detrimental effects on the growth of sudden water table changes leading to permanent waterlogging, but little implications for its wood density and hydraulic architecture. Rewetting actions should thus account for the loss of carbon allocation into wood and ensure suitable conditions for alder growth in temperate peatland forests.

Biodiversity of the Ingoda River ecosystem

The results of a study of the biodiversity of hydrobionts in the Ingoda River are presented. In phytoplankton sixty six taxa of algae with a rank below the genus have been identified. The zooplankton contains 21 species. The species composition of the macrophytobenthos includes 5 taxa. In the flora of hydrophytes, 15 plant species have been identified. The zoobenthos contains 40 species. Our researches have been showed that widespread species prevail in the flora and fauna of hydrobionts in the Ingoda River. Two alien species (Elodea canadensis and Gmelinoides fasciatus) have been recorded in the Kenon Lake. A very rare East Siberian species of mayfly Acanthametropus nikolskyi has been recorded in the Ingoda River zoobenthos.

A chromosome-scale genome assembly for the holly (Ilex polyneura) provides insights into genomic adaptations to elevation in Southwest China

Southwest China is a plant diversity hotspot. The near-cosmopolitan genus Ilex (c. 664 spp., Aquifoliaceae) reaches its maximum diversity in this region, with many narrow-range and a few widespread species. Divergent selection on widespread species leads to local adaptation, with consequences for both conservation and utilization, but is counteracted by geneflow. Many Ilex species are utilized as teas, medicines, ornamentals, honey plants, and timber, but variation below the species level is largely uninvestigated. We therefore studied the widespread Ilex polyneura, which occupies most of the elevational range available and is cultivated for its decorative leafless branches with persistent red fruits. We assembled a chromosome-scale genome using approximately 100x whole genome long-read and short-read sequencing combined with Hi-C sequencing. The genome is approximately 727.1 Mb, with a contig N50 size of 5 124 369 bp and a scaffold N50 size of 36 593 620 bp, for which the BUSCO score was 97.6%, and 98.9% of the assembly was anchored to 20 pseudochromosomes. Out of 32 838 genes predicted, 96.9% were assigned functions. Two whole genome duplication events were identified. Using this genome as a reference, we conducted a population genomics study of 112 individuals from 21 populations across the elevation range using restriction site-associated DNA sequencing (RADseq). Most populations clustered into four clades separated by distance and elevation. Selective sweep analyses identified 34 candidate genes potentially under selection at different elevations, with functions related to responses to abiotic and biotic stresses. This first high-quality genome in the Aquifoliales will facilitate the further domestication of the genus.

Shallow water hydroids (Cnidaria, Hydrozoa) from the 2002 NOWRAMP cruise to the Northwestern Hawaiian Islands

Forty-two species of hydroids, excluding stylasterids, are reported in the present collection from the Northwestern Hawaiian Islands. Of these, four are anthoathecates and 38 are leptothecates. Among the latter, Sertularella affinicostata and Monotheca gibbosa are described as new species. The binomen Halopteris longibrachia is proposed as a new replacement name for Plumularia polymorpha var. sibogae Billard, 1913, an invalid junior primary homonym of P. sibogae Billard, 1911. Based largely on evidence from earlier molecular phylogenies, the genus Disertasia Neppi, 1917 is resurrected to accommodate species including Dynamena crisioides Lamouroux, 1824, Sertularia disticha Bosc, 1802, and Sia. moluccana Pictet, 1893. Sertularella robusta Coughtrey, 1876 is an invalid junior primary homonym of Sla. gayi var. robusta Allman, 1874a, and has been replaced here by the binomen Sla. quasiplana Trebilcock, 1928, originally described as Sla. robusta var. quasiplana Trebilcock, 1928. Clytia hummelincki (Leloup, 1935) is referred to the synonymy of its senior subjective synonym, C. brevithecata (Thornely, 1900). Following Reversal of Precedence provisions in the International Code of Zoological Nomenclature to preserve prevailing usage of binomena, the familiar names Sia. disticha Bosc, 1802 (also known as Dynamena disticha) and Lytocarpia phyteuma (Stechow, 1919b) are designated nomena protecta and assigned precedence over their virtually unknown senior synonyms Hydra quinternana Bosc, 1797 and Aglaophenia clavicula Whitelegge, 1899, respectively, names now reduced to the status of nomena oblita. Twenty species are reported for the first time from Hawaii [Eudendrium merulum Watson, 1985, Phialellidae (undetermined), Hebella sp., Hebellopsis scandens (Bale, 1888), H. sibogae Billard, 1942, Clytia brevithecata, C. linearis (Thornely, 1900), C. cf. noliformis (McCrady, 1859), Halecium sp., Sla. affinicostata, Sla. angulosa Bale, 1894, Pasya heterodonta (Jarvis, 1922), Tridentata orthogonalis (Gibbons & Ryland, 1989), Pycnotheca producta (Bale, 1881), Monotheca gibbosa, H. longibrachia, A. postdentata Billard, 1913, A. suensonii Jäderholm, 1896, A. whiteleggei Bale, 1888, and L. flexuosa (Lamouroux, 1816)]. Sertularia orthogonalis, reported for only the third time worldwide, is assigned to the genus Tridentata Stechow, 1920. Hydroids of the NOWRAMP 2002 collection consisted largely of presumptive widespread species, with over 75% of them having been reported elsewhere in the tropical Indo-west Pacific region.

Reevaluating the Species Status of the Southern Ghost Pipe, Monotropa brittonii (Ericaceae)

Abstract— Relationships among members of Ericaceae subfamily Monotropoideae have been difficult to resolve due to reduction and convergent evolution in these parasitic plants. All species in this subfamily are fully mycoheterotrophic, meaning they obtain nutrients by parasitizing fungi rather than through photosynthesis. Here, we examine relationships and host specificity in one of the most widespread species in this subfamily, Monotropa uniflora. We use several lines of evidence to investigate whether there is support for recognizing a segregate, M. brittonii, as distinct. Based on molecular and morphological analysis of Monotropa collected throughout its range in the United States, we find two distinct lineages, one of which corresponds morphologically and geographically to Small’s M. brittonii. We identified several morphological characters that differ between the two species. We also observed a high degree of fungal host specificity in M. brittonii, which appears to parasitize almost exclusively Lactifluus subgenus Lactariopsis section Albati. Additionally, M. brittonii was primarily collected from Florida scrub, which are xeric, shrub-dominated habitats that differ substantially from the mesic forests where M. uniflora typically occurs. Based on these molecular, morphological, and ecological differences, we support recognition of M. brittonii as distinct from M. uniflora.

The interaction of climate history and evolution impacts alpine biodiversity assembly differently in freshwater and on land

Quaternary climate fluctuations can affect biodiversity assembly through speciation in two non-mutually-exclusive ways: a glacial species pump, where isolation in glacial refugia accelerates allopatric speciation, and adaptive radiation during ice-free periods. Here we detected biogeographic and genetic signatures associated with both mechanisms in the generation of the European Alps biodiversity. Age distributions of endemic and widespread species within aquatic and terrestrial taxa (amphipods, fishes, amphibians, butterflies and flowering plants) revealed that endemic fish evolved only in lakes, are highly sympatric and mainly of Holocene age, consistent with adaptive radiation. Endemic amphipods are ancient, suggesting preglacial radiation with limited range expansion and local Pleistocene survival, perhaps facilitated by a groundwater-dwelling lifestyle. Terrestrial endemics are mostly of Pleistocene age, and are thus more consistent with the glacial species pump. The lack of evidence for Holocene adaptive radiation in the terrestrial biome may be attributable to a faster range expansion of these taxa after glacial retreats, though fewer stable environments may also have contributed to differences between terrestrial areas and lakes. The high proportion of young, endemic species make the Alps vulnerable to climate change, but the mechanisms and consequences of species loss will likely differ between biomes because of their distinct histories.

Reconstruction of intrageneric relationships within the Indo-West Pacific littoral crab genus Metopograpsus (Decapoda, Brachyura, Grapsidae): an alternative speciation order according to a 28S rDNA molecular phylogeny

The genus Metopograpsus H. Milne Edwards, 1853 is widespread throughout the Indo-West Pacific and currently consists of seven species that can only be separated by minor morphological differences. Therefore, it represents a good example for the usefulness of genetic analyses for identification and classification. In order to obtain phylogenetic information at both lower and higher evolutionary levels, it is best to use a combination of mitochondrial and nuclear molecular markers. Here we present for the first time a molecular phylogeny based on a relative long fragment of the 28S rRNA nuclear gene for the genus Metopograpsus, after application of newly developed primers. Our data suggest an alternative intrageneric speciation order, with M. thukuhar and M. cannicci holding a basal position and a monophyletic grouping of M. frontalis, M. oceanicus and M. quadridentatus, which differs from prior phylogenetic reconstructions. Previously recognized intraspecific phylogeographic patterns in M. latifrons and M. quadridentatus could not be confirmed, due to limited variability of this conserved nuclear gene and due to an incomplete geographic coverage of the corresponding species. In contrast, the previously indicated phylogenetic subdivision within the formerly widespread species M. thukuhar, which led to the recent description of M. cannicci, is here supported.