amino acid racemization
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2021 ◽  
Author(s):  
Trinidad Torres ◽  
José E. Ortiz ◽  
Rosa Mediavilla ◽  
Yolanda Sánchez-Palencia ◽  
Juan Ignacio Santisteban ◽  
...  

AbstractThe coastal zone in which the lagoons of La Mata and Torrevieja (Eastern Spain) developed can be described as a compilation of geo-hazards typical of the Mediterranean realm. This study has focused mainly on those linked to recent tectonics. Extensive use of the amino acid racemization dating method allowed us to establish the evolution of all the geomorphological units differentiated in the area, the most striking manifestation being at the La Mata Lagoon Bar, where MIS 5 deposits settled on MIS 7 sediments along a marked erosive unconformity, thereby attesting coastal uplift between these two stages. In addition, recent uplift processes were reflected on stepped abrasion platforms and, in some cases, enormous boulders were transported over these platforms by extreme surge waves. Furthermore, we obtained feasible evidence that, during the end of MIS 5, an earthquake with an offshore epicenter linked to Torrevieja Fault, Bajo Segura Fault or the set of faults linked to the former, was responsible for tsunami surge deposits represented in accumulations of randomly arranged and well-preserved Glycymeris and Acanthocardia shells. Recent catastrophic effects linked to the earthquakes were also detected. In this regard, comparison of the paleontological and taphonomic analyses allowed us to discern between wave and tsunami surge deposits. Therefore, evidence of these hazards undoubtedly points to important future (and present) erosive and/or catastrophic processes, which are enhanced by the presence of tourist resorts and salt-mining industry. Thus, these sites are also threatened by future increases in sea level in the context of warmer episodes, attested by raised marine fossil deposits. At the north of Cervera Cape, beaches will be eroded, without any possibility of sediment input from the starved Segura River delta. At the south of this cape, waves (and tsunamis) will erode the soft rocks that built up the cliff, creating deep basal notches.


2021 ◽  
Author(s):  
Trinidad Torres ◽  
José E. Ortiz ◽  
Rosa Mediavilla ◽  
Yolanda Sánchez-Palencia ◽  
Juan Ignacio Santisteban ◽  
...  

Abstract The coastal zone in which the lagoons of La Mata and Torrevieja (Eastern Spain) developed can be described as a compilation of geo-hazards typical of the Mediterranean realm. This study has focused mainly on those linked to recent tectonics. Extensive use of the amino acid racemization dating method allowed us to establish the evolution of all the geomorphological units differentiated in the area, the most striking manifestation being at the La Mata Lagoon Bar, where MIS 5 deposits settled on MIS 7 sediments along a marked erosive unconformity, thereby attesting coastal uplift between these two stages. In addition, recent uplift processes were reflected on stepped abrasion platforms and, in some cases, enormous boulders were transported over these platforms by extreme surge waves. Furthermore, we obtained feasible evidence that, during the end of MIS 5, an earthquake with an offshore epicenter linked to Torrevieja Fault, Bajo Segura Fault or the set of faults linked to the former, was responsible for tsunami surge deposits represented in accumulations of randomly arranged and well preserved Glycymeris and Acanthocardia shells. Recent catastrophic effects linked to the earthquakes were also detected. In this regard, comparison of the paleontological and taphonomic analyses allowed us to discern between wave and tsunami surge deposits. Therefore, evidence of these hazards undoubtedly points to important future (and present) erosive and/or catastrophic processes, which are enhanced by the presence of tourist resorts and salt-mining industry. Thus, these sites are also threatened by future increases in sea level in the context of warmer episodes, attested by raised marine fossil deposits. At the north of Cervera Cape, beaches will be eroded, without any possibility of sediment input from the starved Segura River delta. South of this cape, waves (and tsunamis) will erode the soft rocks that built up the cliff, creating deep basal notches and causing rockfall and the collapse of the overlying buildings.


2021 ◽  
Author(s):  
Ciro Cerrone ◽  
Matteo Vacchi ◽  
Alessandro Fontana ◽  
Alessio Rovere

<p>An open access database containing raw data of Last Interglacial sea-level proxies for the Western Mediterranean has been compiled by reviewing hundreds of original published papers in accordance with the WALIS template (https://warmcoasts.eu/world-atlas.html). WALIS allows collecting both the relative sea-level (RSL) indicators and ages data in a standardized format. Ca. 360 sea-level index points for the coasts of Spain, France, Italy, Albania, Algeria and Morocco have been included in the database. The sea-level index points of the database are related to ca. 350 samples dated by a wide range of dating techniques, e.g., U-series, Amino Acid Racemization, Luminescence (Tl/OSL) and Electron Spin Resonance methods or chronostratigraphically correlated to marine deposits bearing P. latus and “Senegalese fauna”. In fact, for some areas of the Mediterranean Sea, the “Senegalese fauna” is indicative of the MIS 5e.</p><p>Among the eleven types of sea-level indicators of our database, the majority of them are represented by marine terraces, beach deposits (or beachrocks), and tidal notches. Whenever the relationship between the RSL indicators and the former sea-level could not be quantified, such indicators have been considered as marine or terrestrial limiting points. An indirect age of the tidal notches has been provided by correlation with the nearby dated deposit. In the case no precise elevation information has been reported by the Authors, the elevation error of RSL datapoints has been reassessed in the 20 % of the elevation value, more a 5% if the sea-level datum was lacking in the scientific papers we have reviewed.  Overall, the quality of each RSL datapoints and the associated age have been ranked in a 0 to 5 scale score according to Rovere et al., (2020).</p><p> </p><p><strong>References</strong></p><p>Rovere, A., Ryan, D., Murray-Wallace, C., Simms, A., Vacchi, M., Dutton, A., Gowan, E., 2020. Descriptions of database fields for the World Atlas of Last Interglacial Shorelines (WALIS) (Version 1,0). Zenodo. https://doi.org/http://doi.org/10.5281/zenodo.3961544</p>


Amino Acids ◽  
2021 ◽  
Author(s):  
Anders Broberg ◽  
Christina Nord ◽  
Jolanta J. Levenfors ◽  
Joakim Bjerketorp ◽  
Bengt Guss ◽  
...  

AbstractIsopedopeptins are antibiotic cyclic lipodepsipeptides containing the subsequence L-Thr—L-2,3-diaminopropanoic acid—D-Phe—L-Val/L-3-hydroxyvaline. Acidic hydrolysis of isopedopeptins in D2O showed the D-Phe residues to racemize extensively in peptides with L-3-hydroxyvaline but not in peptides with L-Val. Similarly, one Leu residue in pedopeptins, which are related peptides containing the subsequence Leu—2,3-diaminopropanoic acid—Leu—L-Val/L-3-hydroxyvaline, was found to racemize in peptides with L-3-hydroxyvaline. Model tetrapeptides, L-Ala—L-Phe—L-Val/3-hydroxyvaline—L-Ala, gave the corresponding results, i.e. racemization of L-Phe only when linked to a L-3-hydroxyvaline. We propose the racemization to proceed via an oxazoline intermediate involving Phe/Leu and the L-3-hydroxyvaline residues. The 3-hydroxyvaline residue may form a stable tertiary carbocation by loss of the sidechain hydroxyl group as water after protonation. Elimination of the Phe/Leu H-2 and ring-closure from the carbonyl oxygen onto the carbocation results in the suggested oxazoline intermediate. The reversed reaction leads to either retained or inversed configuration of Phe/Leu. Such racemization during acidic hydrolysis may occur whenever a 3-hydroxyvaline residue or any amino acid that can form a stable carbocation on the C-3, is present in a peptide. The proposed mechanism for racemization was supported by incorporation of 18O in the 3-hydroxyvaline sidechain when the acidic hydrolysis was performed in H2O/H218O (1:1). The 2,3-diaminopropanoic residues of isopedopeptins and pedopeptins were also found to racemize during acidic hydrolysis, as previously described. Based on the results, the configuration of the Leu and 2,3-diaminopropanoic acid residues of the pedopeptins were reassigned to be L-Leu and D-Leu, and 2 × L-2,3-diaminopropanoic acid.


2021 ◽  
Vol 13 (1) ◽  
pp. 171-197
Author(s):  
Evan J. Gowan ◽  
Alessio Rovere ◽  
Deirdre D. Ryan ◽  
Sebastian Richiano ◽  
Alejandro Montes ◽  
...  

Abstract. Coastal southeast South America is one of the classic locations where there are robust, spatially extensive records of past high sea level. Sea-level proxies interpreted as last interglacial (Marine Isotope Stage 5e, MIS 5e) exist along the length of the Uruguayan and Argentinian coast with exceptional preservation especially in Patagonia. Many coastal deposits are correlated to MIS 5e solely because they form the next-highest terrace level above the Holocene highstand; however, dating control exists for some landforms from amino acid racemization, U∕Th (on molluscs), electron spin resonance (ESR), optically stimulated luminescence (OSL), infrared stimulated luminescence (IRSL), and radiocarbon dating (which provides minimum ages). As part of the World Atlas of Last Interglacial Shorelines (WALIS) database, we have compiled a total of 60 MIS 5 proxies attributed, with various degrees of precision, to MIS 5e. Of these, 48 are sea-level indicators, 11 are marine-limiting indicators (sea level above the elevation of the indicator), and 1 is terrestrial limiting (sea level below the elevation of the indicator). Limitations on the precision and accuracy of chronological controls and elevation measurements mean that most of these indicators are considered to be low quality. The database is available at https://doi.org/10.5281/zenodo.3991596 (Gowan et al., 2020).


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