Lecture Notes in Computer Science - Algorithms in Bioinformatics
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Published By Springer Berlin Heidelberg

9783540290087, 9783540318125

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A Faster Algorithm for Detecting Network Motifs

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_14 ◽

2005 ◽

pp. 165-177 ◽

Author(s):

Sebastian Wernicke

Keyword(s):

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Generalized Planted (l,d)-Motif Problem with Negative Set

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_22 ◽

2005 ◽

pp. 264-275 ◽

Author(s):

Henry C. M. Leung ◽

Francis Y. L. Chin

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Perfect Sorting by Reversals Is Not Always Difficult

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_19 ◽

2005 ◽

pp. 228-238 ◽

Author(s):

Sèverine Bérard ◽

Anne Bergeron ◽

Cedric Chauve ◽

Christophe Paul

Keyword(s):

Sorting By Reversals

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An Efficient Reduction from Constrained to Unconstrained Maximum Agreement Subtree

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_9 ◽

2005 ◽

pp. 104-115 ◽

Author(s):

Z. S. Peng ◽

H. F. Ting

Keyword(s):

Efficient Reduction

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Improved Maintenance of Molecular Surfaces Using Dynamic Graph Connectivity

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_33 ◽

2005 ◽

pp. 401-413 ◽

Author(s):

Eran Eyal ◽

Dan Halperin

Keyword(s):

Graph Connectivity ◽

Dynamic Graph ◽

Molecular Surfaces

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Time-Window Analysis of Developmental Gene Expression Data with Multiple Genetic Backgrounds

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_5 ◽

2005 ◽

pp. 53-64 ◽

Author(s):

Tamir Tuller ◽

Efrat Oron ◽

Erez Makavy ◽

Daniel A. Chamovitz ◽

Benny Chor

Keyword(s):

Gene Expression ◽

Gene Expression Data ◽

Time Window ◽

Expression Data ◽

Developmental Gene ◽

Developmental Gene Expression ◽

Window Analysis

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A 1.375-Approximation Algorithm for Sorting by Transpositions

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_17 ◽

2005 ◽

pp. 204-215 ◽

Author(s):

Isaac Elias ◽

Tzvika Hartman

Keyword(s):

Approximation Algorithm

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Linear Time Algorithm for Parsing RNA Secondary Structure

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_28 ◽

2005 ◽

pp. 341-352 ◽

Author(s):

Baharak Rastegari ◽

Anne Condon

Keyword(s):

Secondary Structure ◽

Rna Secondary Structure ◽

Linear Time ◽

Time Algorithm ◽

Linear Time Algorithm

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Discovery of Protein Substructures in EM Maps

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_35 ◽

2005 ◽

pp. 423-434 ◽

Author(s):

Keren Lasker ◽

Oranit Dror ◽

Ruth Nussinov ◽

Haim Wolfson

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Efficient Parameterized Algorithm for Biopolymer Structure-Sequence Alignment

Lecture Notes in Computer Science - Algorithms in Bioinformatics ◽

10.1007/11557067_31 ◽

2005 ◽

pp. 376-388 ◽

Author(s):

Yinglei Song ◽

Chunmei Liu ◽

Xiuzhen Huang ◽

Russell L. Malmberg ◽

Ying Xu ◽

...

Keyword(s):

Sequence Alignment ◽

Parameterized Algorithm ◽

Biopolymer Structure

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