Leveraging community science data for population assessments during a pandemic

2022 ◽  
Author(s):  
Paige E. Howell ◽  
Patrick K. Devers ◽  
Orin J. Robinson ◽  
J. Andrew Royle
2021 ◽  
Author(s):  
Iman Momeni‐Dehaghi ◽  
Joseph R. Bennett ◽  
Greg W. Mitchell ◽  
Trina Rytwinski ◽  
Lenore Fahrig

Evolution ◽  
2021 ◽  
Author(s):  
Nicholas M. Justyn ◽  
Corey T. Callaghan ◽  
Geoffrey E. Hill

2021 ◽  
Vol 8 ◽  
Author(s):  
Alex Borowicz ◽  
Heather J. Lynch ◽  
Tyler Estro ◽  
Catherine Foley ◽  
Bento Gonçalves ◽  
...  

Expansive study areas, such as those used by highly-mobile species, provide numerous logistical challenges for researchers. Community science initiatives have been proposed as a means of overcoming some of these challenges but often suffer from low uptake or limited long-term participation rates. Nevertheless, there are many places where the public has a much higher visitation rate than do field researchers. Here we demonstrate a passive means of collecting community science data by sourcing ecological image data from the digital public, who act as “eco-social sensors,” via a public photo-sharing platform—Flickr. To achieve this, we use freely-available Python packages and simple applications of convolutional neural networks. Using the Weddell seal (Leptonychotes weddellii) on the Antarctic Peninsula as an example, we use these data with field survey data to demonstrate the viability of photo-identification for this species, supplement traditional field studies to better understand patterns of habitat use, describe spatial and sex-specific signals in molt phenology, and examine behavioral differences between the Antarctic Peninsula’s Weddell seal population and better-studied populations in the species’ more southerly fast-ice habitat. While our analyses are unavoidably limited by the relatively small volume of imagery currently available, this pilot study demonstrates the utility an eco-social sensors approach, the value of ad hoc wildlife photography, the role of geographic metadata for the incorporation of such imagery into ecological analyses, the remaining challenges of computer vision for ecological applications, and the viability of pelage patterns for use in individual recognition for this species.


PLoS ONE ◽  
2021 ◽  
Vol 16 (9) ◽  
pp. e0257226
Author(s):  
Mei-Ling Emily Feng ◽  
Judy Che-Castaldo

Biodiversity loss is a global ecological crisis that is both a driver of and response to environmental change. Understanding the connections between species declines and other components of human-natural systems extends across the physical, life, and social sciences. From an analysis perspective, this requires integration of data from different scientific domains, which often have heterogeneous scales and resolutions. Community science projects such as eBird may help to fill spatiotemporal gaps and enhance the resolution of standardized biological surveys. Comparisons between eBird and the more comprehensive North American Breeding Bird Survey (BBS) have found these datasets can produce consistent multi-year abundance trends for bird populations at national and regional scales. Here we investigate the reliability of these datasets for estimating patterns at finer resolutions, inter-annual changes in abundance within town boundaries. Using a case study of 14 focal species within Massachusetts, we calculated four indices of annual relative abundance using eBird and BBS datasets, including two different modeling approaches within each dataset. We compared the correspondence between these indices in terms of multi-year trends, annual estimates, and inter-annual changes in estimates at the state and town-level. We found correspondence between eBird and BBS multi-year trends, but this was not consistent across all species and diminished at finer, inter-annual temporal resolutions. We further show that standardizing modeling approaches can increase index reliability even between datasets at coarser temporal resolutions. Our results indicate that multiple datasets and modeling methods should be considered when estimating species population dynamics at finer temporal resolutions, but standardizing modeling approaches may improve estimate correspondence between abundance datasets. In addition, reliability of these indices at finer spatial scales may depend on habitat composition, which can impact survey accuracy.


2020 ◽  
pp. 1-16
Author(s):  
Christopher B. Mowry ◽  
Adel Lee ◽  
Zachary P. Taylor ◽  
Nadeem Hamid ◽  
Shannon Whitney ◽  
...  

2020 ◽  
Vol 248 ◽  
pp. 108653 ◽  
Author(s):  
Montague H.C. Neate-Clegg ◽  
Joshua J. Horns ◽  
Frederick R. Adler ◽  
M. Çisel Kemahlı Aytekin ◽  
Çağan H. Şekercioğlu

2021 ◽  
Author(s):  
Mary M. Gardiner ◽  
Kayla I. Perry ◽  
Christopher B. Riley ◽  
Katherine J. Turo ◽  
Yvan A. Delgado de la flor ◽  
...  

Author(s):  
Alison Johnston ◽  
Wesley M. Hochachka ◽  
Matthew E. Strimas‐Mackey ◽  
Viviana Ruiz Gutierrez ◽  
Orin J. Robinson ◽  
...  

2021 ◽  
Author(s):  
Bradley J. Cosentino ◽  
James P. Gibbs

AbstractUrbanization is the dominant trend of global land use change. The replicated nature of environmental change associated with urbanization should drive parallel evolution, yet insight into the repeatability of evolutionary processes in urban areas has been limited by a lack of multi-city studies. Here we leverage community science data on coat color in >60,000 eastern gray squirrels (Sciurus carolinensis) across 43 North American cities to test for parallel clines in melanism, a genetically based trait associated with thermoregulation and crypsis in gray squirrels. We show the prevalence of melanism in these mammals was positively associated with urbanization. Urban-rural clines in melanism were strongest in the largest cities with extensive forest cover and weakest or absent in cities with warm winter temperature, where thermal selection likely limits the prevalence of melanism. Our results demonstrate that novel traits can evolve in a highly repeatable manner among urban areas, modified by factors intrinsic to individual cities, including size, land cover, and climate.


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