New altitudinal records of Panthera onca (Carnivora: Felidae) in the Andean region of Ecuador

We report two records of jaguars (Panthera onca) registered with camera traps at 2300 and 2660 m a.s.l. in the Ecuadorian Andes, which represent the first verifiable records of the species above 2000 m in Ecuador. As the first records of jaguars from Río Negro-Sopladora National Park and Tapichalaca Reserve, these records raise important questions about the species’ ecology and conservation in Andean montane forests. From a regional perspective, these records may indicate connectivity between jaguar populations inhabiting both sides of the Andes. Sustained monitoring of wildlife populations is necessary to discern the significance of these records and help develop strategies to ensure the conservation of this highly mobile species across the increasingly fragmented Andean-Amazonian landscapes of southern Ecuador.

Assessing the Relative Impacts of Roadkill and Nest Poaching on the Population Viability of the Blue-and-Yellow Macaw, Ara ararauna (Aves: Psittaciformes), in a Brazilian National Park

The blue-and-yellow macaw (Ara ararauna) is suffering from higher roadkill rates (RK) at the Emas National Park (ENP), an important Brazilian National Park in the Cerrado biome. This species is also a victim of nest poaching for illegal trade. We modeled the blue-and-yellow macaw population’s viability in ENP and how this viability is affected by roadkill and nest poaching. We hereby report that the species is critically at risk and could be extinct in about a decade when considering both threats. Without considering any threat, 150 individuals are necessary to maintain a viable population. When individuals are harvested at a roadkill rate of 0.008 individuals/km/year and at twice this level, the viability figures increase to 4500 and 7500 birds, respectively. For nest poaching, we estimated that 2000 individuals are required to maintain a viable population. When both threats are present, 5000 individuals are necessary. The dynamics of the population are highly sensitive to the age at which females reproduce for the first time and the proportion of reproducing adult females, followed by the rate of adult survival. Our model demonstrates how even a non-threatened highly mobile species, such as the blue-and-yellow macaw, may be at risk due to human activities.

Population Dynamics Reveal a Core Community of the Common Bottlenose Dolphin (Tursiops truncatus) in Open Waters of the South-Western Gulf of Mexico

The presence of transient and temporary individuals in capture-mark-recapture studies may violate the assumption on equal catchability, and thus yield biased estimates. We investigated the effects of residency patterns on population parameters of bottlenose dolphins inhabiting the coastal waters off the Alvarado Lagoon System (ALS), Veracruz, Mexico. We hypothesized that this population is open but there exists a “core community” that behaves as a closed population. Between 2006 and 2010, we conducted 75 photo-identification surveys and recorded 263 dolphin group encounters, in which 231 dolphins were identified. Individuals present during only one season, classified as transients (n = 85), were excluded from the study, and a standardized residency index (IH4) was computed for each dolphin that remained in the sample (n = 146). We used the K-means clustering method to split the sample into groups based on individual (seasonal, annual) IH4 values. These clusters were named as regular residents (RR, n = 55), occasional residents (OR, n = 45), and occasional visitors (OV, n = 46). The cumulative frequency of newly identified individuals displayed an asymptotic trend for the whole sample and all clusters, indicating that most of the individuals present in the study area during the study period were identified. The assumption of demographic closure was tested to define the core community, and was rejected for the whole sample and the OV cluster (p < 0.001 in both cases), indicating that the population is open. The closure assumption was not rejected for RR and OR clusters (χ2 = 6.88, DF = 13, p = 0.91, and χ2 = 17.8, DF = 16, p = 0.33, respectively), indicating that these clusters were demographically closed over the 5-year period. Thus, we defined this aggregation of individuals as the “core community”. The closed population model Mth indicated that the total abundance of this core community was 123 individuals (95% CI: 114–133). Our results provide quantitative evidence of the existence of a core community in open waters of the Gulf of Mexico, and points toward residency pattern as a main driver of population dynamics. These results highlight the importance of considering residency patterns when dealing with heterogeneity in the sample of a highly mobile species.

Spatio-Temporal Variability in White Shark (Carcharodon carcharias) Movement Ecology During Residency and Migration Phases in the Western North Atlantic

Understanding how mobile, marine predators use three-dimensional space over time is central to inform management and conservation actions. Combining tracking technologies can yield powerful datasets over multiple spatio-temporal scales to provide critical information for these purposes. For the white shark (Carcharodon carcharias), detailed movement and migration information over ontogeny, including inter- and intra-annual variation in timing of movement phases, is largely unknown in the western North Atlantic (WNA), a relatively understudied area for this species. To address this need, we tracked 48 large juvenile to adult white sharks between 2012 and 2020, using a combination of satellite-linked and acoustic telemetry. Overall, WNA white sharks showed repeatable and predictable patterns in horizontal movements, although there was variation in these movements related to sex and size. While most sharks undertook an annual migratory cycle with the majority of time spent over the continental shelf, some individuals, particularly adult females, made extensive forays into the open ocean as far east as beyond the Mid-Atlantic Ridge. Moreover, increased off-shelf use occurred with body size even though migration and residency phases were conserved. Summer residency areas included coastal Massachusetts and portions of Atlantic Canada, with individuals showing fidelity to specific regions over multiple years. An autumn/winter migration occurred with sharks moving rapidly south to overwintering residency areas in the southeastern United States Atlantic and Gulf of Mexico, where they remained until the following spring/summer. While broad residency and migration periods were consistent, migratory timing varied among years and among individuals within years. White sharks monitored with pop-up satellite-linked archival tags made extensive use of the water column (0–872 m) and experienced a broad range of temperatures (−0.9 – 30.5°C), with evidence for differential vertical use based on migration and residency phases. Overall, results show dynamic inter- and intra-annual three-dimensional patterns of movements conserved within discrete phases. These results demonstrate the value of using multiple tag types to track long-term movements of large mobile species. Our findings expand knowledge of the movements and migration of the WNA white shark population and comprise critically important information to inform sound management strategies for the species.

Human-modified landscapes provide key foraging areas for a threatened flying mammal: The grey-headed flying-fox

Urban expansion is a major threat to natural ecosystems but also creates novel opportunities that adaptable species can exploit. The grey-headed flying-fox (Pteropus poliocephalus) is a threatened, highly mobile species of bat that is increasingly found in human-dominated landscapes, leading to many management and conservation challenges. Flying-fox urbanisation is thought to be a result of diminishing natural foraging habitat or increasing urban food resources, or both. However, little is known about landscape utilisation of flying-foxes in human-modified areas, and how this may differ in natural areas. Here we examine positional data from 98 satellite-tracked P. poliocephalus for up to 5 years in urban and non-urban environments, in relation to vegetation data and published indices of foraging habitat quality. Our findings indicate that human-modified foraging landscapes sustain a large proportion of the P. poliocephalus population year-round. When individuals roosted in non-urban and minor-urban areas, they relied primarily on wet and dry sclerophyll forest, forested wetlands, and rainforest for foraging, and preferentially visited foraging habitat designated as high-quality. However, our results highlight the importance of human-modified foraging habitats throughout the species’ range, and particularly for individuals that roosted in major-urban environments. The exact plant species that exist in human-modified habitats are largely undocumented; however, where this information was available, foraging by P. poliocephalus was associated with different dominant plant species depending on whether individuals roosted in ‘urban’ or ‘non-urban’ areas. Overall, our results demonstrate clear differences in urban- and non-urban landscape utilisation by foraging P. poliocephalus. However, further research is needed to understand the exact foraging resources used, particularly in human-modified habitats, and hence what attracts flying-foxes to urban areas. Such information could be used to modify the urban foraging landscape, to assist long-term habitat management programs aimed at minimising human-wildlife conflict and maximising resource availability within and outside of urban environments.

Impacts of vacancy-induced polarization and distortion on diffusion in solid electrolyte Li 3 OCl

Lithium-rich oxychloride antiperovskites are promising solid electrolytes for enabling next-generation batteries. Here, we report a comprehensive study varying Li + concentrations in Li 3 OCl using ab initio molecular dynamics simulations. The simulations accurately capture the complex interactions between Li + vacancies ( V Li ′ ), the dominant mobile species in Li 3 OCl . The V Li ′ polarize and distort the host lattice, inducing additional non-vacancy-mediated diffusion mechanisms and correlated diffusion events that reduce the activation energy barrier at concentrations as low as 1.5% V Li ′ . Our analyses of discretized diffusion events in both space and time illustrate the critical interplay between correlated dynamics, polarization and local distortion in promoting ionic conductivity in Li 3 OCl . This article is part of the Theo Murphy meeting issue ‘Understanding fast-ion conduction in solid electrolytes’.

Butterfly biodiversity in the city is driven by the interaction of the urban landscape and species traits: a call for contextualised management

Context Urbanisation is an environmental filter for many species that leads to community homogenisation, with a few species inhabiting isolated patches (e.g. public and private gardens and parks) embedded within the urban landscape. Promoting biodiversity in urban areas requires understanding which species traits allow species to survive the urban landscape. Objectives The objective of this study was to assess how species traits and landscape factors combine to allow species functional groups to live in the city. Methods We used butterfly count data collected by volunteers in 24 gardens of Barcelona city, during 2018 and 2019. Species were clustered in functional groups according to their traits. We applied a multinomial choice model to test for the effect of the landscape on the different functional groups. Results Three functional groups became prevalent in the city while a fourth, containing most sedentary specialist species, was filtered out. Although the observed groups had similar species richness, abundances varied depending on urban landscape characteristics. Specialist sedentary specialists and medium mobile species were all favoured by patch connectivity; while the presence of mobile generalist species was only enhanced by habitat quality. Our results indicate that butterfly communities are more diverse in highly connected gardens. Conclusions Our study highlights the need of contextualised management with actions accounting for the species functional groups, rather than a management focused on general species richness. It demonstrates that urban landscape planning must focus on improving connectivity inside the city in order to diversify the community composition.

High turn-over rates at the upper range limit and elevational source-sink dynamics in a widespread songbird

The formation of an upper distributional range limit for species breeding along mountain slopes is often based on environmental gradients resulting in changing demographic rates towards high elevations. However, we still lack an empirical understanding of how the interplay of demographic parameters forms the upper range limit in highly mobile species. Here, we study apparent survival and within-study area dispersal over a 700 m elevational gradient in barn swallows (Hirundo rustica) by using 15 years of capture-mark-recapture data. Annual apparent survival of adult breeding birds decreased while breeding dispersal probability of adult females, but not males increased towards the upper range limit. Individuals at high elevations dispersed to farms situated at elevations lower than would be expected by random dispersal. These results suggest higher turn-over rates of breeding individuals at high elevations, an elevational increase in immigration and thus, within-population source-sink dynamics between low and high elevations. The formation of the upper range limit therefore is based on preference for low-elevation breeding sites and immigration to high elevations. Thus, shifts of the upper range limit are not only affected by changes in the quality of high-elevation habitats but also by factors affecting the number of immigrants produced at low elevations.

Longitudinal demographic data collection

Several long-term field studies are running worldwide on many taxa across the Tree of Life. These longitudinal studies involve several visits to the study population with repeated observations/measurements. Demographic data can be collected at the population level (e.g. time series of population counts) or at the individual level (e.g. monitoring of marked and/or georeferenced individuals throughout their life). These data are then used to estimate demographic parameters such as annual population abundances, survival, growth, and reproductive rates. This chapter introduces the reader to monitoring methods (including recent technologies) that can be implemented in the field to collect specific demographic data on mobile species (e.g. birds, mammals) at both the population and individual levels, while dealing with imperfect detection. It also presents the procedures and the type of demographic data that can be collected on sessile species (e.g. corals, plants) at both levels. Finally, the chapter concludes with new aspects, current biases, and arising challenges for future long-term field studies.

Regional Variation in Communities of Demersal Fishes and Scavengers Across the CCZ and Pacific Ocean

We synthesize and analyze data from visual transecting approaches and baited camera studies to evaluate fish and invertebrate scavenger communities across the Clarion-Clipperton Zone (CCZ), an area of intense deep-sea mining interest, and neighboring areas of the abyssal Pacific. In abyssal regions including the CCZ most of the top predators are large mobile fishes and crustaceans, and the majority of these are also opportunistic scavengers. Top predators can exert important ecosystem influences and they can be susceptible to sustained anthropogenic disturbances, necessitating their study in the CCZ mining region. In total 157 baited camera deployments from 3 mining exploration license areas, 4 APEIs (Areas of Particular Environmental Interest – one type of no mining zone) and 4 other areas in the Pacific (Hawaii, California, New Zealand and Guam) and 122 visual transects from 7 exploration license areas, 4 no mining zones, and the Peru Basin (DISCOL area) were examined. Many taxa were observed in both sampling techniques but visual transects viewed few fishes overall. Fish and scavenger communities and diversity varied across the CCZ, significantly for baited camera data with a parallel but insignificant pattern for visual transects suggesting that even for these highly mobile species, not all regions of the CCZ are equivalent and the CCZ cannot be managed as one homogenous region. Further CCZ communities were different than communities elsewhere in the abyssal Pacific. The regional variations in community composition are largely the result of varying abundances of species rather than species presence/absence given that most, but not all, of the fishes and scavengers observed have very large ranges. On a more local scale, seamounts had a significantly different scavenger community than neighboring abyssal plains and thus contribute to regional diversity. Visual transect data revealed a similar but insignificant pattern due to low sample sizes. Given the coarse spatial resolution of sampling of fish and scavenger communities in the CCZ, it is not possible to evaluate if no mining zones (APEIs) adequately represent these communities nor where, or if, any biogeographic boundaries exist in the CCZ region. It is possible to conclude that a network of APEIs that covers the spectrum of available habitats at regional and more local scales will be key to conserving fish and scavenger biodiversity.