Bridging protein rigidity theory and normal modes using kino‐geometric analysis with hierarchical constraint relaxation

PAMM ◽  
2018 ◽  
Vol 18 (1) ◽  
Author(s):  
Dominik Budday ◽  
Sigrid Leyendecker ◽  
Henry van den Bedem
Keyword(s):  
Geometric Analysis ◽  
Normal Modes ◽  
Rigidity Theory ◽  
Constraint Relaxation

Liquid crystalline ordering of paired helical filaments in neurofibrillary tangles of Alzheimer's disease

1986 ◽  
Vol 44 ◽  
pp. 348-349
Author(s):  
D.F. Clapin ◽  
V.J.A. Montpetit
Keyword(s):  
Alzheimer’S Disease ◽  
Alzheimer's Disease ◽  
Neurofibrillary Tangles ◽  
Liquid Crystalline ◽  
Amyloid Fibrils ◽  
Geometric Analysis ◽  
Paired Helical Filaments ◽  
Microscopic Level ◽  
Light Microscopic Level ◽  
Regular Spacing

Alzheimer's disease is characterized by the accumulation of abnormal filamentous proteins. The most important of these are amyloid fibrils and paired helical filaments (PHF). PHF are located intraneuronally forming bundles called neurofibrillary tangles. The designation of these structures as "tangles" is appropriate at the light microscopic level. However, localized domains within individual tangles appear to demonstrate a regular spacing which may indicate a liquid crystalline phase. The purpose of this paper is to present a statistical geometric analysis of PHF packing.

Geometric analysis

1976 ◽  
Vol 55 (2) ◽  
pp. 67
Author(s):  
C.A. Gladman ◽  
R.A. Williams
Keyword(s):  
Geometric Analysis

The Electrophysiological Mechanisms of Constraint Relaxation Studied with A Chinese Logogriph Task

2013 ◽  
Vol 45 (5) ◽  
pp. 508-516 ◽  
Author(s):  
Qiang XING ◽  
Zhonglu ZHANG ◽  
Mengruo WANG ◽  
Jinlian ZHANG ◽  
Jing WANG ◽  
...  
Keyword(s):  
Constraint Relaxation

Filtering methods for finite-time normal modes and atmospheric error growth

2000 ◽  
Vol 42 ◽  
pp. 1482
Author(s):  
Mozheng Wei ◽  
Jorgen S. Frederiksen ◽  
Steve Kepert
Keyword(s):  
Finite Time ◽  
Normal Modes ◽  
Error Growth

Gravitational Waves

2018 ◽  
Author(s):  
Michele Maggiore
Keyword(s):  
Black Hole ◽  
Perturbation Theory ◽  
Gravitational Waves ◽  
Transfer Functions ◽  
Normal Modes ◽  
Cosmological Perturbation ◽  
Tests Of General Relativity ◽  
Pulsar Timing ◽  
Tensor Perturbations ◽  
Stochastic Backgrounds

A comprehensive and detailed account of the physics of gravitational waves and their role in astrophysics and cosmology. The part on astrophysical sources of gravitational waves includes chapters on GWs from supernovae, neutron stars (neutron star normal modes, CFS instability, r-modes), black-hole perturbation theory (Regge-Wheeler and Zerilli equations, Teukoslky equation for rotating BHs, quasi-normal modes) coalescing compact binaries (effective one-body formalism, numerical relativity), discovery of gravitational waves at the advanced LIGO interferometers (discoveries of GW150914, GW151226, tests of general relativity, astrophysical implications), supermassive black holes (supermassive black-hole binaries, EMRI, relevance for LISA and pulsar timing arrays). The part on gravitational waves and cosmology include discussions of FRW cosmology, cosmological perturbation theory (helicity decomposition, scalar and tensor perturbations, Bardeen variables, power spectra, transfer functions for scalar and tensor modes), the effects of GWs on the Cosmic Microwave Background (ISW effect, CMB polarization, E and B modes), inflation (amplification of vacuum fluctuations, quantum fields in curved space, generation of scalar and tensor perturbations, Mukhanov-Sasaki equation,reheating, preheating), stochastic backgrounds of cosmological origin (phase transitions, cosmic strings, alternatives to inflation, bounds on primordial GWs) and search of stochastic backgrounds with Pulsar Timing Arrays (PTA).

Triatomic molecules

2018 ◽  
Author(s):  
John H. D. Eland ◽  
Raimund Feifel
Keyword(s):  
Degrees Of Freedom ◽  
Normal Modes ◽  
Electronic States ◽  
Triatomic Molecules ◽  
Doubly Charged Ions ◽  
Spectral Bands ◽  
Valence Electrons ◽  
Doubly Charged ◽  
Charged Ions ◽  
Double Ionisation

Double ionisation of the triatomic molecules presented in this chapter shows an added degree of complexity. Besides potentially having many more electrons, they have three vibrational degrees of freedom (three normal modes) instead of the single one in a diatomic molecule. For asymmetric and bent triatomic molecules multiple modes can be excited, so the spectral bands may be congested in all forms of electronic spectra, including double ionisation. Double photoionisation spectra of H2O, H2S, HCN, CO2, N2O, OCS, CS2, BrCN, ICN, HgCl2, NO2, and SO2 are presented with analysis to identify the electronic states of the doubly charged ions. The order of the molecules in this chapter is set first by the number of valence electrons, then by the molecular weight.

Geometry and Physics: Volume II

2018 ◽  
Keyword(s):  
Moduli Spaces ◽  
Mirror Symmetry ◽  
Geometric Analysis ◽  
Mathematical Physics ◽  
Poisson Geometry ◽  
Special Holonomy ◽  
Low Dimensional Topology ◽  
Generalized Complex Structures ◽  
Wide Range ◽  
Low Dimensional

These volumes contain the proceedings of the conference held at Aarhus, Oxford and Madrid in September 2016 to mark the seventieth birthday of Nigel Hitchin, one of the world’s foremost geometers and Savilian Professor of Geometry at Oxford. The proceedings contain twenty-nine articles, including three by Fields medallists (Donaldson, Mori and Yau). The articles cover a wide range of topics in geometry and mathematical physics, including the following: Riemannian geometry, geometric analysis, special holonomy, integrable systems, dynamical systems, generalized complex structures, symplectic and Poisson geometry, low-dimensional topology, algebraic geometry, moduli spaces, Higgs bundles, geometric Langlands programme, mirror symmetry and string theory. These volumes will be of interest to researchers and graduate students both in geometry and mathematical physics.

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