Nanocube-Based Fluidic Glycan Array

Author(s):  
Hung-Jen Wu ◽  
Akshi Singla ◽  
Joshua D. Weatherston
Keyword(s):  
2019 ◽  
Vol 116 (6) ◽  
pp. 1958-1967 ◽  
Author(s):  
Andreas Geissner ◽  
Anika Reinhardt ◽  
Christoph Rademacher ◽  
Timo Johannssen ◽  
João Monteiro ◽  
...  

Interactions between glycans and glycan binding proteins are essential for numerous processes in all kingdoms of life. Glycan microarrays are an excellent tool to examine protein–glycan interactions. Here, we present a microbe-focused glycan microarray platform based on oligosaccharides obtained by chemical synthesis. Glycans were generated by combining different carbohydrate synthesis approaches including automated glycan assembly, solution-phase synthesis, and chemoenzymatic methods. The current library of more than 300 glycans is as diverse as the mammalian glycan array from the Consortium for Functional Glycomics and, due to its microbial focus, highly complementary. This glycan platform is essential for the characterization of various classes of glycan binding proteins. Applications of this glycan array platform are highlighted by the characterization of innate immune receptors and bacterial virulence factors as well as the analysis of human humoral immunity to pathogenic glycans.


2020 ◽  
Vol 7 (2) ◽  
pp. e676 ◽  
Author(s):  
Kayluz F. Boligan ◽  
Johanna Oechtering ◽  
Christian W. Keller ◽  
Benjamin Peschke ◽  
Robert Rieben ◽  
...  

ObjectiveTo explore the repertoire of glycan-specific immunoglobulin G (IgG) antibodies in treatment-naive patients with relapsing-remitting multiple sclerosis (RRMS).MethodsA systems-level approach combined with glycan array technologies was used to determine specificities and binding reactivities of glycan-specific IgGs in treatment-naive patients with RRMS compared with patients with noninflammatory and other inflammatory neurologic diseases.ResultsWe identified a unique signature of glycan-binding IgG in MS with high reactivities to the dietary xenoglycan N-glycolylneuraminic acid (Neu5Gc) and the self-glycan N-acetylneuraminic acid (Neu5Ac). Increased reactivities of serum IgG toward Neu5Gc and Neu5Ac were additionally observed in an independent, treatment-naive cohort of patients with RRMS.ConclusionPatients with MS show increased IgG reactivities to structurally related xenogeneic and human neuraminic acids. The discovery of these glycan-specific epitopes as immune targets and potential biomarkers in MS merits further investigation.


2012 ◽  
Vol 22 (22) ◽  
pp. 6839-6843 ◽  
Author(s):  
Jeffrey C. Gildersleeve ◽  
Baomei Wang ◽  
Samuel Achilefu ◽  
Zhude Tu ◽  
Mai Xu

2019 ◽  
Vol 93 (15) ◽  
Author(s):  
Marie Kubota ◽  
Rei Matsuoka ◽  
Tateki Suzuki ◽  
Koji Yonekura ◽  
Yusuke Yanagi ◽  
...  

ABSTRACT Mumps virus (MuV) is an important aerosol-transmitted human pathogen causing epidemic parotitis, meningitis, encephalitis, and deafness. MuV preferentially uses a trisaccharide containing α2,3-linked sialic acid as a receptor. However, given the MuV tropism toward glandular tissues and the central nervous system, an additional glycan motif(s) may also serve as a receptor. Here, we performed a large-scale glycan array screen with MuV hemagglutinin-neuraminidase (MuV-HN) attachment proteins by using 600 types of glycans from The Consortium for Functional Glycomics Protein-Glycan Interaction Core in an effort to find new glycan receptor motif(s). According to the results of the glycan array, we successfully determined the crystal structures of MuV-HN proteins bound to newly identified glycan motifs, sialyl LewisX (SLeX) and the oligosaccharide portion of the GM2 ganglioside (GM2-glycan). Interestingly, the complex structures showed that SLeX and GM2-glycan share the same configuration with the reported trisaccharide motif, 3′-sialyllactose (3′-SL), at the binding site of MuV-HN, while SLeX and GM2-glycan have several unique interactions compared with those of 3′-SL. Thus, MuV-HN protein can allow an additional spatial modification in GM2-glycan and SLeX at the second and third carbohydrates from the nonreducing terminus of the core trisaccharide structure, respectively. Importantly, MuV entry was efficiently inhibited in the presence of 3′-SL, SLeX, or GM2-glycan derivatives, which indicates that these motifs can serve as MuV receptors. The α2,3-sialylated oligosaccharides, such as SLeX and 3′-sialyllactosamine, are broadly expressed in various tissues, and GM2 exists mainly in neural tissues and the adrenal gland. The distribution of these glycan motifs in human tissues/organs may have bearing on MuV tropism. IMPORTANCE Mumps virus (MuV) infection is characterized by parotid gland swelling and can cause pancreatitis, orchitis, meningitis, and encephalitis. MuV-related hearing loss is also a serious complication because it is usually irreversible. MuV outbreaks have been reported in many countries, even in high-vaccine-coverage areas. MuV has tropism toward glandular tissues and the central nervous system. To understand the unique MuV tropism, revealing the mechanism of receptor recognition by MuV is very important. Here, using a large-scale glycan array and X-ray crystallography, we show that MuV recognizes sialyl LewisX and GM2 ganglioside as receptors, in addition to a previously reported MuV receptor, a trisaccharide containing an α2,3-linked sialic acid. The flexible recognition of these glycan receptors by MuV may explain the unique tropism and pathogenesis of MuV. Structures will also provide a template for the development of effective entry inhibitors targeting the receptor-binding site of MuV.


2004 ◽  
Vol 101 (49) ◽  
pp. 17033-17038 ◽  
Author(s):  
O. Blixt ◽  
S. Head ◽  
T. Mondala ◽  
C. Scanlan ◽  
M. E. Huflejt ◽  
...  

2011 ◽  
Vol 130 (1) ◽  
pp. 138-146 ◽  
Author(s):  
Francis Jacob ◽  
Darlene R. Goldstein ◽  
Nicolai V. Bovin ◽  
Tatiana Pochechueva ◽  
Marianne Spengler ◽  
...  

2018 ◽  
Vol 32 (S1) ◽  
Author(s):  
Iain Wilson ◽  
Barbara Eckmair ◽  
Alba Hykollari ◽  
Shi Yan ◽  
Jorick Vanbeselaere ◽  
...  

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