2020 ◽  
Vol 101 ◽  
pp. 374
Author(s):  
T. Sell ◽  
L. Warmbrod ◽  
M. Trotochaud ◽  
S. Ravi ◽  
E. Martin ◽  
...  

2020 ◽  
Author(s):  
Eleanor A Ainscoe ◽  
Barbara Hofmann ◽  
Felipe Colon ◽  
Iacopo Ferrario ◽  
Quillon Harpham ◽  
...  

<p>The current increase in the volume and quality of Earth Observation (EO) data being collected by satellites offers the potential to contribute to applications across a wide range of scientific domains. It is well established that there are correlations between characteristics that can be derived from EO satellite data, such as land surface temperature or land cover, and the incidence of some diseases. Thanks to the reliable frequent acquisition and rapid distribution of EO data it is now possible for this field to progress from using EO in retrospective analyses of historical disease case counts to using it in operational forecasting systems.</p><p>However, bringing together EO-based and non-EO-based datasets, as is required for disease forecasting and many other fields, requires carefully designed data selection, formatting and integration processes. Similarly, it requires careful communication between collaborators to ensure that the priorities of that design process match the requirements of the application.</p><p>Here we will present work from the D-MOSS (Dengue forecasting MOdel Satellite-based System) project. D-MOSS is a dengue fever early warning system for South and South East Asia that will allow public health authorities to identify areas at high risk of disease epidemics before an outbreak occurs in order to target resources to reduce spreading of epidemics and improve disease control. The D-MOSS system uses EO, meteorological and seasonal weather forecast data, combined with disease statistics and static layers such as land cover, as the inputs into a dengue fever model and a water availability model. Water availability directly impacts dengue epidemics due to the provision of mosquito breeding sites. The datasets are regularly updated with the latest data and run through the models to produce a new monthly forecast. For this we have designed a system to reliably feed standardised data to the models. The project has involved a close collaboration between remote sensing scientists, geospatial scientists, hydrologists and disease modelling experts. We will discuss our approach to the selection of data sources, data source quality assessment, and design of a processing and ingestion system to produce analysis-ready data for input to the disease and water availability models.</p>


2018 ◽  
Vol 98 (5) ◽  
pp. 1489-1497 ◽  
Author(s):  
Matthew Graham ◽  
Jonathan E. Suk ◽  
Saki Takahashi ◽  
C. Jessica Metcalf ◽  
A. Paez Jimenez ◽  
...  

2018 ◽  
Vol 22 (16) ◽  
pp. 5377-5383 ◽  
Author(s):  
Waheed Ahmad ◽  
Ayaz Ahmad ◽  
Chuncheng Lu ◽  
Barkat Ali Khoso ◽  
Lican Huang

Plant Disease ◽  
2016 ◽  
Vol 100 (11) ◽  
pp. 2306-2312 ◽  
Author(s):  
B. S. Grabow ◽  
D. A. Shah ◽  
E. D. DeWolf

Stripe rust has reemerged as a problematic disease in Kansas wheat. However, there are no stripe rust forecasting models specific to Kansas wheat production. Our objective was to identify environmental variables associated with stripe rust epidemics in Kansas winter wheat as an initial step in the longer-term goal of developing predictive models for stripe rust to be used within the state. Mean yield loss due to stripe rust on susceptible varieties was estimated from 1999 to 2012 for each of the nine Kansas crop reporting districts (CRD). A CRD was classified as having experienced a stripe rust epidemic when yield loss due to the disease equaled or exceeded 1%, and a nonepidemic otherwise. Epidemics were further classified as having been moderate or severe if yield loss was 1 to 14% or greater than 14%, respectively. The binary epidemic categorizations were linked to a matrix of 847 variables representing monthly meteorological and soil moisture conditions. Classification trees were used to select variables associated with stripe rust epidemic occurrence and severity (conditional on an epidemic having occurred). Selected variables were evaluated as predictors of stripe rust epidemics within a general estimation equations framework. The occurrence of epidemics within CRD was linked to soil moisture during the fall and winter months. In the spring, severe epidemics were linked to optimal (7 to 12°C) temperatures. Simple environmentally based stripe rust models at the CRD level may be combined with field-level disease observations and an understanding of varietal reaction to stripe rust as part of an operational disease forecasting system in Kansas.


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