Simple Query Language Requirements for Research Data Management

Author(s):  
Gary D. Anderson
Data ◽  
2019 ◽  
Vol 4 (2) ◽  
pp. 83 ◽  
Author(s):  
Timm Fitschen ◽  
Alexander Schlemmer ◽  
Daniel Hornung ◽  
Henrik tom Wörden ◽  
Ulrich Parlitz ◽  
...  

We present CaosDB, a Research Data Management System (RDMS) designed to ensure seamless integration of inhomogeneous data sources and repositories of legacy data in a FAIR way. Its primary purpose is the management of data from biomedical sciences, both from simulations and experiments during the complete research data lifecycle. An RDMS for this domain faces particular challenges: research data arise in huge amounts, from a wide variety of sources, and traverse a highly branched path of further processing. To be accepted by its users, an RDMS must be built around workflows of the scientists and practices and thus support changes in workflow and data structure. Nevertheless, it should encourage and support the development and observation of standards and furthermore facilitate the automation of data acquisition and processing with specialized software. The storage data model of an RDMS must reflect these complexities with appropriate semantics and ontologies while offering simple methods for finding, retrieving, and understanding relevant data. We show how CaosDB responds to these challenges and give an overview of its data model, the CaosDB Server and its easy-to-learn CaosDB Query Language. We briefly discuss the status of the implementation, how we currently use CaosDB, and how we plan to use and extend it.


Author(s):  
Fabian Cremer ◽  
Silvia Daniel ◽  
Marina Lemaire ◽  
Katrin Moeller ◽  
Matthias Razum ◽  
...  

Neuroforum ◽  
2021 ◽  
Vol 0 (0) ◽  
Author(s):  
Michael Hanke ◽  
Franco Pestilli ◽  
Adina S. Wagner ◽  
Christopher J. Markiewicz ◽  
Jean-Baptiste Poline ◽  
...  

Abstract Decentralized research data management (dRDM) systems handle digital research objects across participating nodes without critically relying on central services. We present four perspectives in defense of dRDM, illustrating that, in contrast to centralized or federated research data management solutions, a dRDM system based on heterogeneous but interoperable components can offer a sustainable, resilient, inclusive, and adaptive infrastructure for scientific stakeholders: An individual scientist or laboratory, a research institute, a domain data archive or cloud computing platform, and a collaborative multisite consortium. All perspectives share the use of a common, self-contained, portable data structure as an abstraction from current technology and service choices. In conjunction, the four perspectives review how varying requirements of independent scientific stakeholders can be addressed by a scalable, uniform dRDM solution and present a working system as an exemplary implementation.


2016 ◽  
Vol Volume 112 (Number 7/8) ◽  
Author(s):  
Margaret M. Koopman ◽  
Karin de Jager ◽  
◽  

Abstract Digital data archiving and research data management have become increasingly important for institutions in South Africa, particularly after the announcement by the National Research Foundation, one of the principal South African academic research funders, recommending these actions for the research that they fund. A case study undertaken during the latter half of 2014, among the biological sciences researchers at a South African university, explored the state of data management and archiving at this institution and the readiness of researchers to engage with sharing their digital research data through repositories. It was found that while some researchers were already engaged with digital data archiving in repositories, neither researchers nor the university had implemented systematic research data management.


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