Size-Exclusion Chromatography in Structural Analysis of Intrinsically Disordered Proteins

2012 ◽  
pp. 179-194 ◽  
Author(s):  
Vladimir N. Uversky
Keyword(s):  
Structural Analysis ◽  
Size Exclusion Chromatography ◽  
Intrinsically Disordered Proteins ◽  
Size Exclusion ◽  
Disordered Proteins ◽  
Intrinsically Disordered ◽  
Exclusion Chromatography

scholarly journals Hsp70 inhibits aggregation of Islet amyloid polypeptide by binding to the heterogeneous prenucleation oligomers

2020 ◽  
Author(s):  
Neeraja Chilukoti ◽  
Bankanidhi Sahoo ◽  
S Deepa ◽  
Sreelakshmi Cherakara ◽  
Mithun Maddheshiya ◽  
...  
Keyword(s):  
Intrinsically Disordered Proteins ◽  
Islet Amyloid Polypeptide ◽  
Correlation Spectroscopy ◽  
Size Exclusion ◽  
Disordered Proteins ◽  
Strong Interactions ◽  
Islet Amyloid ◽  
Intrinsically Disordered ◽  
Exclusion Chromatography ◽  
In The Beginning

AbstractMolecular chaperone Hsp70 plays important roles in the pathology of amyloid diseases by inhibiting aberrant aggregation of proteins. However, mechanism of the interactions of Hsp70 with the amyloidogenic intrinsically disordered proteins (IDPs) is not clear. Here, we use Hsp70 from different organisms to show that it inhibits aggregation of Islet amyloid polypeptide (IAPP) at substoichiometric concentrations even in absence of ATP. The effect is found to be the strongest if Hsp70 is added in the beginning of aggregation but progressively less if added later, indicating role of Hsp70 in preventing primary nucleation possibly via interactions with the prefibrillar oligomers of IAPP. Fluorescence Correlation Spectroscopy (FCS) measurements of the solutions containing fluorescently labelled Hsp70 and IAPP exhibit fluorescence bursts suggesting formation of heterogeneous complexes of oligomeric IAPP binding to multiple molecules of Hsp70. Size exclusion chromatography and field flow fractionation are then used to fractionate the smaller complexes. Multiangle light scattering and FCS measurements suggest that these complexes comprise of monomers of Hsp70 and small oligomers of IAPP. However, concentration of the complexes is measured to be a few nanomolar amidst several μmolar of free Hsp70 and IAPP. Hence, our results indicate that Hsp70 interacts poorly with the monomers but strongly with oligomers of IAPP. This is likely a common feature of the interactions between the chaperones and the amyloidogenic IDPs. While strong interactions with the oligomers prevent aberrant aggregation, poor interaction with the monomers avert interference with the functions of the IDPs.

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