Directed Components Analysis: An Analytic Method for the Removal of Biophysical Artifacts from EEG Data

Author(s):  
Phan Luu ◽  
Robert Frank ◽  
Scott Kerick ◽  
Don M. Tucker
2014 ◽  
Vol 2014 ◽  
pp. 1-10 ◽  
Author(s):  
João Carlos G. D. Costa ◽  
Paulo José G. Da-Silva ◽  
Renan Moritz V. R. Almeida ◽  
Antonio Fernando C. Infantosi

The well-known multivariate technique Principal Components Analysis (PCA) is usually applied to a sample, and so component scores are subjected to sampling variability. However, few studies address their stability, an important topic when the sample size is small. This work presents three validation procedures applied to PCA, based on confidence regions generated by a variant of a nonparametric bootstrap called the partial bootstrap: (i) the assessment of PC scores variability by the spread and overlapping of “confidence regions” plotted around these scores; (ii) the use of the confidence regions centroids as a validation set; and (iii) the definition of the number of nontrivial axes to be retained for analysis. The methods were applied to EEG data collected during a postural control protocol with twenty-four volunteers. Two axes were retained for analysis, with 91.6% of explained variance. Results showed that the area of the confidence regions provided useful insights on the variability of scores and suggested that some subjects were not distinguishable from others, which was not evident from the principal planes. In addition, potential outliers, initially suggested by an analysis of the first principal plane, could not be confirmed by the confidence regions.


Biostatistics ◽  
2018 ◽  
Vol 21 (1) ◽  
pp. 139-157 ◽  
Author(s):  
Aaron Scheffler ◽  
Donatello Telesca ◽  
Qian Li ◽  
Catherine A Sugar ◽  
Charlotte Distefano ◽  
...  

Summary Electroencephalography (EEG) data possess a complex structure that includes regional, functional, and longitudinal dimensions. Our motivating example is a word segmentation paradigm in which typically developing (TD) children, and children with autism spectrum disorder (ASD) were exposed to a continuous speech stream. For each subject, continuous EEG signals recorded at each electrode were divided into one-second segments and projected into the frequency domain via fast Fourier transform. Following a spectral principal components analysis, the resulting data consist of region-referenced principal power indexed regionally by scalp location, functionally across frequencies, and longitudinally by one-second segments. Standard EEG power analyses often collapse information across the longitudinal and functional dimensions by averaging power across segments and concentrating on specific frequency bands. We propose a hybrid principal components analysis for region-referenced longitudinal functional EEG data, which utilizes both vector and functional principal components analyses and does not collapse information along any of the three dimensions of the data. The proposed decomposition only assumes weak separability of the higher-dimensional covariance process and utilizes a product of one dimensional eigenvectors and eigenfunctions, obtained from the regional, functional, and longitudinal marginal covariances, to represent the observed data, providing a computationally feasible non-parametric approach. A mixed effects framework is proposed to estimate the model components coupled with a bootstrap test for group level inference, both geared towards sparse data applications. Analysis of the data from the word segmentation paradigm leads to valuable insights about group-region differences among the TD and verbal and minimally verbal children with ASD. Finite sample properties of the proposed estimation framework and bootstrap inference procedure are further studied via extensive simulations.


Biometrics ◽  
2017 ◽  
Vol 73 (3) ◽  
pp. 999-1009 ◽  
Author(s):  
Kyle Hasenstab ◽  
Aaron Scheffler ◽  
Donatello Telesca ◽  
Catherine A. Sugar ◽  
Shafali Jeste ◽  
...  

2022 ◽  
Vol 15 (2) ◽  
pp. 209-223
Author(s):  
Abigail Dickinson ◽  
Charlotte DiStefano ◽  
Shafali Jeste ◽  
Aaron Scheffler ◽  
Damla Şenturk

Author(s):  
Thomas W. Shattuck ◽  
James R. Anderson ◽  
Neil W. Tindale ◽  
Peter R. Buseck

Individual particle analysis involves the study of tens of thousands of particles using automated scanning electron microscopy and elemental analysis by energy-dispersive, x-ray emission spectroscopy (EDS). EDS produces large data sets that must be analyzed using multi-variate statistical techniques. A complete study uses cluster analysis, discriminant analysis, and factor or principal components analysis (PCA). The three techniques are used in the study of particles sampled during the FeLine cruise to the mid-Pacific ocean in the summer of 1990. The mid-Pacific aerosol provides information on long range particle transport, iron deposition, sea salt ageing, and halogen chemistry.Aerosol particle data sets suffer from a number of difficulties for pattern recognition using cluster analysis. There is a great disparity in the number of observations per cluster and the range of the variables in each cluster. The variables are not normally distributed, they are subject to considerable experimental error, and many values are zero, because of finite detection limits. Many of the clusters show considerable overlap, because of natural variability, agglomeration, and chemical reactivity.


1983 ◽  
Vol 26 (1) ◽  
pp. 2-9 ◽  
Author(s):  
Vincent J. Samar ◽  
Donald G. Sims

The relationship between the latency of the negative peak occurring at approximately 130 msec in the visual evoked-response (VER) and speechreading scores was investigated. A significant product-moment correlation of -.58 was obtained between the two measures, which confirmed the fundamental effect but was significantly weaker than that previously reported in the literature (-.90). Principal components analysis of the visual evoked-response waveforms revealed a previously undiscovered early VER component, statistically independent of the latency measure, which in combination with two other components predicted speechreading with a multiple correlation coefficient of S4. The potential significance of this new component for the study of individual differences in speechreading ability is discussed.


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