The Role of Plant and Soil Processes in Determining the Fate of Atmospheric Nitrogen

Author(s):  
B. L. Williams ◽  
H. A. Anderson
Author(s):  
Antoine Berger ◽  
Alexandre Boscari ◽  
Alain Puppo ◽  
Renaud Brouquisse

Abstract The interaction between legumes and rhizobia leads to the establishment of a symbiotic relationship between plant and bacteria. This is characterized by the formation of a new organ, the nodule, which facilitates the fixation of atmospheric nitrogen (N2) by nitrogenase through the creation of a hypoxic environment. Nitric oxide (NO) accumulates at each stage of the symbiotic process. NO is involved in defense responses, nodule organogenesis and development, nitrogen fixation metabolism, and senescence induction. During symbiosis, either successively or simultaneously, NO regulates gene expression, modulates enzyme activities, and acts as a metabolic intermediate in energy regeneration processes via phytoglobin-NO respiration and the bacterial denitrification pathway. Due to the transition from normoxia to hypoxia during nodule formation, and the progressive presence of the bacterial partner in the growing nodules, NO production and degradation pathways change during the symbiotic process. This review analyzes the different source and degradation pathways of NO, and highlights the role of nitrate reductases and hemoproteins of both the plant and bacterial partners in the control of NO accumulation.


2006 ◽  
Vol 3 (3) ◽  
pp. 271-280 ◽  
Author(s):  
T. Jickells

Abstract. This contribution to the Spot-On volume considers the magnitude and composition of atmospheric nitrogen inputs to the oceans and then goes on to consider the impacts of these inputs. Effects in open ocean and coastal areas are probably different. Offshore atmospheric inputs may produce a small enhancement of overall ocean productivity and hence CO2 drawdown. In coastal waters atmospheric inputs contribute significantly to overall eutrophication pressure, but evidence that they trigger algal blooms is limited. Management of atmospheric inputs to coastal waters to mitigate eutrophication pressures requires that emissions be managed over a wide area reflecting the efficient long range transport of atmospheric nitrogen. Strategies for management of oxidised and reduced nitrogen deposition will be different reflecting their different rates of deposition.


mSphere ◽  
2020 ◽  
Vol 5 (3) ◽  
Author(s):  
Ana Valladares ◽  
Cristina Velázquez-Suárez ◽  
Antonia Herrero

ABSTRACT The Anabaena organismic unit is a filament of communicating cells. Under conditions of nitrogen scarcity, some cells along the filament differentiate into heterocysts, which are specialized in the fixation of atmospheric N2 and provide the vegetative cells with N2 fixation products. At a certain stage, the differentiation process becomes irreversible, so that even when nitrogen is replenished, no return to the vegetative cell state takes place, possibly as a consequence of loss of cell division capacity. Upon N-stepdown, midcell FtsZ-rings were detected in vegetative cells, but not in differentiating cells, and this was also the case for ZipN, an essential protein that participates in FtsZ tethering to the cytoplasmic membrane and divisome organization. Later, expression of ftsZ was arrested in mature heterocysts. PatA is a protein required for the differentiation of intercalary heterocysts in Anabaena. The expression level of the patA gene was increased in differentiating cells, and a mutant strain lacking PatA exhibited enhanced FtsZ-rings. PatA was capable of direct interactions with ZipN and SepF, another essential component of the Anabaena Z-ring. Thus, PatA appears to promote inhibition of cell division in the differentiating cells, allowing progress of the differentiation process. PatA, which in mature heterocysts was detected at the cell poles, could interact also with SepJ, a protein involved in production of the septal junctions that provide cell-cell adhesion and intercellular communication in the filament, hinting at a further role of PatA in the formation or stability of the intercellular structures that are at the basis of the multicellular character of Anabaena. IMPORTANCE Anabaena is a cyanobacterial model that represents an ancient and simple form of biological multicellularity. The Anabaena organism is a filament of cohesive and communicating cells that can include cells specialized in different tasks. Thus, under conditions of nitrogen scarcity, certain cells of the filament differentiate into heterocysts, which fix atmospheric nitrogen and provide organic nitrogen to the rest of cells, which, in turn, provide heterocysts with organic carbon. Heterocyst differentiation involves extensive morphological, biochemical, and genetic changes, becoming irreversible at a certain stage. We studied the regulation during heterocyst differentiation of several essential components of the Anabaena cell division machinery and found that protein PatA, which is required for differentiation and is induced in differentiating cells, interacts with essential cell division factors and destabilizes the cell division complex. This suggests a mechanism for establishment of commitment to differentiation by inhibition of cell division.


2020 ◽  
Author(s):  
Elin Ristorp Aas ◽  
Terje Koren Berntsen ◽  
Alexander Eiler ◽  
Helge Hellevang

<p>The representation of soil carbon dynamics is a major source of uncertainty in Earth System Models (ESMs). The terrestrial carbon pool is more than twice the size of the atmospheric pool. Therefore, the role of soil carbon as a source or a sink of atmospheric carbon, and in feedback loops is important to quantify in a changing climate. Decomposition processes of organic matter in soil have often been represented by first order decay equations, which make comparison and validation against observations difficult. Therefore, quantification of the uncertainties  and validation of improved parameterizations are problematic. An emerging approach to tackle these challenges is to represent microbial soil processes explicitly in the models. Following this approach, we have built a process based module that represent the carbon fluxes during soil decomposition, from aboveground litter to soil organic matter (SOM). The role of saprotrophs and mycorrhizal fungi is explicitly represented with separate carbon pools with associated fluxes. On a site level, we compare initial results from the stand alone module with both existing models and observations of carbon pools and fluxes. The observations are from the Norwegian Dovre Mountains, with data from three different alpine communities. These geographic areas are important, because they are subject to changes due to shrubification. In addition, these ecosystems can store large amounts of carbon. By modeling these sites, we gain more insight in the most important processes in soil decomposition, and how different microbial communities affect the carbon dynamics. We will further refine the module by expanding our study with more sites. The long-term objective is to develop an improved module that can be used to represent soil processes in ESMs, and thereby reduce the uncertainty connected to the exchange of carbon between land and atmosphere.</p>


Epidemiology ◽  
2000 ◽  
Vol 11 (3) ◽  
pp. 367 ◽  
Author(s):  
Massimiliano Panella ◽  
Lucio Palin ◽  
Marco Binotti ◽  
Vania Tommasini ◽  
Francesco Di Stanislao

Soil Science ◽  
1978 ◽  
Vol 126 (5) ◽  
pp. 290-296 ◽  
Author(s):  
H. J. DAWSON ◽  
F. C. UGOLINI ◽  
B. F. HRUTFIORD ◽  
J. ZACHARA
Keyword(s):  

2006 ◽  
Vol 3 (1) ◽  
pp. 183-210 ◽  
Author(s):  
T. Jickells

Abstract. This contribution to the Spot-On volume considers the magnitude and composition of atmospheric nitrogen inputs to the oceans and then goes on to consider the impacts of these inputs. Effects in open ocean and coastal areas are probably different. Offshore atmospheric inputs may produce a small enhancement of overall ocean productivity and hence CO2 drawdown. In coastal waters atmospheric inputs contribute significantly to overall eutrophication pressure, but evidence that they trigger algal blooms is limited. Management of atmospheric inputs to coastal waters to mitigate eutrophication pressures requires that emissions be managed over a wide area reflecting the efficient long range transport of atmospheric nitrogen. Strategies for management of oxidised and reduced nitrogen deposition will be different reflecting their different rates of deposition.


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