Molecular evolutionary characterization of an Activator (Ac)-like transposable element sequence from pearl millet (Pennisetum glaucum) (Poaceae)

Genetica ◽  
1994 ◽  
Vol 92 (2) ◽  
pp. 77-89 ◽  
Author(s):  
Amy F. MacRae ◽  
Gavin A. Huttley ◽  
Michael T. Clegg
2021 ◽  
pp. 39-60
Author(s):  
M. L. Choudhary ◽  
M. K. Tripathi ◽  
Sushma Tiwari ◽  
R. K. Pandya ◽  
Neha Gupta ◽  
...  

2019 ◽  
Vol 46 (6) ◽  
pp. 6039-6052 ◽  
Author(s):  
Kummari Divya ◽  
P. B. Kavi Kishor ◽  
Pooja Bhatnagar-Mathur ◽  
Prashanth Singam ◽  
Kiran K. Sharma ◽  
...  

Genetics ◽  
1995 ◽  
Vol 139 (3) ◽  
pp. 1411-1419
Author(s):  
G A Huttley ◽  
A F MacRae ◽  
M T Clegg

Abstract We report an Ac-like sequence from pearl millet (Pennisetum glaucum) and deletion derivative Ac-like sequences from pearl millet and another grass species, Bambusa multiplex. Sequence relationships between the pearl millet and maize Ac elements suggest that Ac/Ds transposable-element family is ancient. Further, the sequence identity between the Bambusa Ac-like sequence and maize Ac implies that the Ac/Ds transposable-element family has been in the grass family since its inception. The Ac-like sequences reported from pearl millet and maize Ac are statistically heterogeneous in pair-wise distance comparisons to each other. Yet, we are unable to discriminate between differential selection or ectopic exchange (recombination and conversion) between nonidentical transposable element homologues, as the cause of the heterogeneity. However, the more extreme heterogeneity exhibited between the previously described pearl millet element and maize Ac seems likely to derive from ectopic exchange between elements with different levels of divergence.


2005 ◽  
Vol 33 (1) ◽  
pp. 215-226 ◽  
Author(s):  
M.B. Arun Kumar ◽  
A. Varier ◽  
R.J. Sherry ◽  
K. Aruna Kumari ◽  
M. Dadlani ◽  
...  

2017 ◽  
Vol 16 (3) ◽  
pp. 260-272 ◽  
Author(s):  
F. T. Sattler ◽  
M. D. Sanogo ◽  
I. A. Kassari ◽  
I. I. Angarawai ◽  
K. W. Gwadi ◽  
...  

AbstractTo promote the utilization of West and Central African (WCA) genetic resources of pearl millet [Pennisetum glaucum (L.) R. Br.], this study aimed at agro-morphological characterization of selected accessions from the pearl millet reference collection, established by the Generation Challenge Program and the International Crops Research Institute for the Semi-Arid Tropics (ICRISAT). A total of 81 accessions were included, comprising 78 landraces originating from 13, predominantly WCA countries and three improved cultivars. All 81 accessions were evaluated together with 18 checks for resistance to the parasitic weed Striga hermonthica (Del.) Benth. in an artificially infested field at one location in Niger. Determined by available seed quantity, 74 accessions were characterized together with seven checks in the rainy season 2009 in field trials under low-input and fertilized conditions in Nigeria, Niger and Mali, respectively. Wide ranges were observed for various traits. Several accessions were identified as sources for specific traits of interest, i.e. long panicles, high-grain density, earliness, Striga resistance and stable yielding across environments. The observed yield inferiority of all Genebank accessions compared with checks may indicate lost adaptation or inbreeding depression due to an insufficient effective population size during multiplication. A principal component analysis revealed an immense diversity but also strong admixture among the tested accessions, i.e. there were no clearly distinct groups. The seed of all genotypes is available from ICRISAT. The online availability of the characterization data is expected to facilitate efficient use of these pearl millet accessions by breeding programmes in WCA and worldwide.


2019 ◽  
Vol 212 ◽  
pp. 160-168 ◽  
Author(s):  
Manisha Yadav ◽  
R.S. Rengasamy ◽  
Deepti Gupta

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