Increased production of pyruvic acid by Escherichia coli RNase G mutants in combination with cra mutations

2007 ◽  
Vol 76 (1) ◽  
pp. 183-192 ◽  
Author(s):  
Taro Sakai ◽  
Naoko Nakamura ◽  
Genryou Umitsuki ◽  
Kazuo Nagai ◽  
Masaaki Wachi
2017 ◽  
Vol 16 (1) ◽  
Author(s):  
Yelin Zhu ◽  
Yan Hua ◽  
Biao Zhang ◽  
Lianhong Sun ◽  
Wenjie Li ◽  
...  

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Minho Lee ◽  
Minju Joo ◽  
Minji Sim ◽  
Se-Hoon Sim ◽  
Hyun-Lee Kim ◽  
...  

AbstractRapid modulation of RNA function by endoribonucleases during physiological responses to environmental changes is known to be an effective bacterial biochemical adaptation. We report a molecular mechanism underlying the regulation of enolase (eno) expression by two endoribonucleases, RNase G and RNase III, the expression levels of which are modulated by oxygen availability in Escherichia coli. Analyses of transcriptional eno-cat fusion constructs strongly suggested the existence of cis-acting elements in the eno 5′ untranslated region that respond to RNase III and RNase G cellular concentrations. Primer extension and S1 nuclease mapping analyses of eno mRNA in vivo identified three eno mRNA transcripts that are generated in a manner dependent on RNase III expression, one of which was found to accumulate in rng-deleted cells. Moreover, our data suggested that RNase III-mediated cleavage of primary eno mRNA transcripts enhanced Eno protein production, a process that involved putative cis-antisense RNA. We found that decreased RNase G protein abundance coincided with enhanced RNase III expression in E. coli grown anaerobically, leading to enhanced eno expression. Thereby, this posttranscriptional up-regulation of eno expression helps E. coli cells adjust their physiological reactions to oxygen-deficient metabolic modes. Our results revealed a molecular network of coordinated endoribonuclease activity that post-transcriptionally modulates the expression of Eno, a key enzyme in glycolysis.


2006 ◽  
Vol 188 (14) ◽  
pp. 5145-5152 ◽  
Author(s):  
Masaru Tamura ◽  
Kangseok Lee ◽  
Christine A. Miller ◽  
Christopher J. Moore ◽  
Yukio Shirako ◽  
...  

ABSTRACT Inactivation or deletion of the RNase E-encoding rne gene of Escherichia coli results in the growth of bacterial cells as filamentous chains in liquid culture (K. Goldblum and D. Apirion, J. Bacteriol. 146:128-132, 1981) and the loss of colony-forming ability (CFA) on solid media. RNase E dysfunction is also associated with abnormal processing of ftsQAZ transcripts (K. Cam, G. Rome, H. M. Krisch, and J.-P. Bouché, Nucleic Acids Res. 24:3065-3070, 1996), which encode proteins having a central role in septum formation during cell division. We show here that RNase E regulates the relative abundances of FtsZ and FtsA proteins and that RNase E depletion results in decreased FtsZ, increased FtsA, and consequently an altered FtsZ/FtsA ratio. However, while restoration of the level of FtsZ to normal in rne null mutant bacteria reverses the filamentation phenotype, it does not restore CFA. Conversely, overexpression of a related RNase, RNase G, in rne-deleted bacteria restores CFA, as previously reported, without affecting FtsZ abundance. Our results demonstrate that RNase E activity is required to maintain a proper cellular ratio of the FtsZ and FtsA proteins in E. coli but that FtsZ deficiency does not account for the nonviability of cells lacking RNase E.


1999 ◽  
Vol 259 (2) ◽  
pp. 483-488 ◽  
Author(s):  
Masaaki Wachi ◽  
Genryou Umitsuki ◽  
Miwa Shimizu ◽  
Ayako Takada ◽  
Kazuo Nagai
Keyword(s):  
16S Rrna ◽  

1998 ◽  
Vol 64 (10) ◽  
pp. 4093-4094 ◽  
Author(s):  
John R. Pollard ◽  
Delphine Rialland ◽  
Timothy D. H. Bugg

ABSTRACT 4-Hydroxy-2-keto-pentanoic acid aldolase from Escherichia coli was identified as a class I aldolase. The enzyme was found to be highly selective for the acetaldehyde acceptor but would accept α-ketobutyric acid or phenylpyruvic acid in place of the pyruvic acid carbonyl donor.


2019 ◽  
Vol 57 (10) ◽  
pp. 910-917 ◽  
Author(s):  
Jaejin Lee ◽  
Dong-Ho Lee ◽  
Che Ok Jeon ◽  
Kangseok Lee

1969 ◽  
Vol 115 (5) ◽  
pp. 947-958 ◽  
Author(s):  
C. J. Lawson ◽  
C. W. McCleary ◽  
Henry I. Nakada ◽  
D. A. Rees ◽  
I. W. Sutherland ◽  
...  

Essentially the same methanolysis products were obtained after methylation of the slime and capsular polysaccharides from Escherichia coli K12 (S53 and S53C sub-strains) and the slime polysaccharides from E. coli K12 (S61), Aerobacter cloacae N.C.T.C. 5290 and Salmonella typhimurium SL1543. These were the methyl glycosides of 2-O-methyl-l-fucose, 2,3-di-O-methyl-l-fucose, 2,3-di-O-methyl-d-glucuronic acid methyl ester, 2,4,6-tri-O-methyl-d-glucose, 2,4,6-tri-O-methyl-d-galactose and the pyruvic acid ketal, 4,6-O-(1′-methoxycarbonylethylidene)-2,3-O-methyl-d-galactose. All were identified as crystalline derivatives from an E. coli polysaccharide. The structure of the ketal was proved by proton-magnetic-resonance and mass spectrometry, and by cleavage to pyruvic acid and 2,3-di-O-methyl-d-galactose. All these polysaccharides are therefore regarded as variants on the same fundamental structure for which the name colanic acid is adopted. Although containing the same sugar residues, quite different methanolysis products were obtained after methylation of the extracellular polysaccharide from Klebsiella aerogenes (1.2 strain). The hydroxypropyl ester of E. coli polysaccharide, when treated with base under anhydrous conditions, underwent β-elimination at the uronate residues with release of a 4,6-O-(1′-alkoxycarbonylethylidene)-d-galactose. Together with the identification of 3-O-(d-glucopyranosyluronic acid)-d-galactose as a partial hydrolysis product, this establishes the nature of most, if not all, of the side chains as O-[4,6-O-(1′-carboxyethylidene)-d-galactopyranosyl]-(1→4)-O-(d-glucopyranosyluronic acid)-(1→3)-d-galactopyranosyl…


2016 ◽  
Vol 430 ◽  
pp. 24-28 ◽  
Author(s):  
Zhifeng Duan ◽  
Sof'ya N. Senchenkova ◽  
Xi Guo ◽  
Andrei V. Perepelov ◽  
Alexander S. Shashkov ◽  
...  

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