Phylogenetic study on a bacterial community in the floodwater of a Japanese paddy field estimated by sequencing 16S rDNA fragments after denaturing gradient gel electrophoresis

Taketoshi Shibagaki-Shimizu; Natsuko Nakayama; Yasunori Nakajima; Kazuo Matsuya; Makoto Kimura; Susumu Asakawa

doi:10.1007/s00374-005-0041-x

Phylogenetic study on a bacterial community in the floodwater of a Japanese paddy field estimated by sequencing 16S rDNA fragments after denaturing gradient gel electrophoresis

Biology and Fertility of Soils ◽

10.1007/s00374-005-0041-x ◽

2005 ◽

Vol 42 (4) ◽

pp. 362-365 ◽

Cited By ~ 10

Author(s):

Taketoshi Shibagaki-Shimizu ◽

Natsuko Nakayama ◽

Yasunori Nakajima ◽

Kazuo Matsuya ◽

Makoto Kimura ◽

...

Keyword(s):

Bacterial Community ◽

16S Rdna ◽

Paddy Field ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Phylogenetic Study ◽

Gradient Gel Electrophoresis

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Characterization of alkalotolerant bacterial community by 16S rDNA-based denaturing gradient gel electrophoresis method for degradation of dibenzofuran in soil microcosm

International Biodeterioration & Biodegradation ◽

10.1016/j.ibiod.2011.08.008 ◽

2011 ◽

Vol 65 (7) ◽

pp. 1073-1080 ◽

Cited By ~ 8

Author(s):

Shweta Kohli Sahni ◽

Prashant Kumar Jaiswal ◽

Purshotam Kaushik ◽

Indu Shekhar Thakur

Keyword(s):

Bacterial Community ◽

16S Rdna ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Soil Microcosm ◽

Gradient Gel Electrophoresis ◽

Electrophoresis Method

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Identification of the Bacterial Community Responsible for Decontaminating Eleme Petrochemical Industrial Effluent Using 16s RDNA PCR Denaturing Gradient Gel Electrophoresis

Nigerian Journal of Technology ◽

10.4314/njt.v33i4.6 ◽

2014 ◽

Vol 33 (4) ◽

pp. 459

Author(s):

CU Ajuzie ◽

EI Atuanya

Keyword(s):

Bacterial Community ◽

16S Rdna ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Industrial Effluent ◽

16S Rdna Pcr ◽

Gradient Gel Electrophoresis

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Assessment of the Bacterial Community for Denitrifying Removal of Nitric Oxide in a Rotating Drum Biofilter by Denaturing Gradient Gel Electrophoresis

Environmental Engineering Science ◽

10.1089/ees.2008.0153 ◽

2009 ◽

Vol 26 (7) ◽

pp. 1189-1196 ◽

Cited By ~ 5

Author(s):

Jun Chen ◽

Zhi-Ye Wang ◽

Yi-Feng Jiang ◽

Hai-Feng Qian ◽

Wei Zhang ◽

...

Keyword(s):

Nitric Oxide ◽

Bacterial Community ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Rotating Drum ◽

Gradient Gel Electrophoresis

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Profiling of Bacterial Species Associated with Haddock Larviculture by PCR Amplification of 16S rDNA and Denaturing Gradient Gel Electrophoresis

Journal of Aquatic Animal Health ◽

10.1577/1548-8667(2001)013<0355:pobsaw>2.0.co;2 ◽

2001 ◽

Vol 13 (4) ◽

pp. 355-363 ◽

Cited By ~ 41

Author(s):

Steve Griffiths ◽

Krista Melville ◽

Marcia Cook ◽

Sherry Vincent ◽

Maurice Pierre ◽

...

Keyword(s):

16S Rdna ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Bacterial Species ◽

Pcr Amplification ◽

Gradient Gel Electrophoresis

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Diversity of methanogenic archaeal communities in Japanese paddy field ecosystem, estimated by denaturing gradient gel electrophoresis

Biology and Fertility of Soils ◽

10.1007/s00374-009-0435-2 ◽

2010 ◽

Vol 46 (4) ◽

pp. 343-353 ◽

Cited By ~ 18

Author(s):

Takeshi Watanabe ◽

Makoto Kimura ◽

Susumu Asakawa

Keyword(s):

Paddy Field ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Gradient Gel Electrophoresis ◽

Field Ecosystem ◽

Archaeal Communities

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Bacterial Community Structure Change Induced by Gamma Irradiation in Hydrocarbon Contaminated and Uncontaminated Soils Revealed by PCR-Denaturing Gradient Gel Electrophoresis

Biotechnology(Faisalabad) ◽

10.3923/biotech.2009.78.85 ◽

2008 ◽

Vol 8 (1) ◽

pp. 78-85 ◽

Cited By ~ 12

Author(s):

Wael S. El-Saye ◽

S. Ghanem

Keyword(s):

Community Structure ◽

Bacterial Community ◽

Gamma Irradiation ◽

Gel Electrophoresis ◽

Bacterial Community Structure ◽

Denaturing Gradient Gel Electrophoresis ◽

Structure Change ◽

Gradient Gel Electrophoresis

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Comparison of Bacterial Community Changes in Fermenting Kimchi at Two Different Temperatures Using a Denaturing Gradient Gel Electrophoresis Analysis

Journal of Microbiology and Biotechnology ◽

10.4014/jmb.1210.10002 ◽

2013 ◽

Vol 23 (1) ◽

pp. 76-84 ◽

Cited By ~ 27

Author(s):

Yeun Hong

Keyword(s):

Bacterial Community ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Different Temperatures ◽

Gradient Gel Electrophoresis ◽

Community Changes

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The structure of the bacterial and archaeal community in a biogas digester as revealed by denaturing gradient gel electrophoresis and 16S rDNA sequencing analysis

Journal of Applied Microbiology ◽

10.1111/j.1365-2672.2008.04064.x ◽

2009 ◽

Vol 106 (3) ◽

pp. 952-966 ◽

Cited By ~ 97

Author(s):

F.H. Liu ◽

S.B. Wang ◽

J.S. Zhang ◽

J. Zhang ◽

X. Yan ◽

...

Keyword(s):

16S Rdna ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Archaeal Community ◽

Sequencing Analysis ◽

16S Rdna Sequencing ◽

Rdna Sequencing ◽

Gradient Gel Electrophoresis

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Denaturing Gradient Gel Electrophoresis Polymorphism for Rapid 16S rDNA Clone Screening and Microbial Diversity Study.

Journal of Bioscience and Bioengineering ◽

10.1263/jbb.93.101 ◽

2002 ◽

Vol 93 (1) ◽

pp. 101-103 ◽

Cited By ~ 2

Author(s):

WEN-TSO LIU ◽

CHUN-LIN HUANG ◽

JIANG YONG HU ◽

LIANGFA SONG ◽

SAY LEONG ONG ◽

...

Keyword(s):

Microbial Diversity ◽

16S Rdna ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Gradient Gel Electrophoresis ◽

Diversity Study ◽

Rdna Clone

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Microbial Community Analysis in the Denitrification Process of Saline-Wastewater by Denaturing Gradient Gel Electrophoresis of PCR-Amplified 16S rDNA and the Cultivation Method.

Journal of Bioscience and Bioengineering ◽

10.1263/jbb.92.346 ◽

2001 ◽

Vol 92 (4) ◽

pp. 346-353 ◽

Cited By ~ 6

Author(s):

SACHIKO YOSHIE ◽

NAOHIRO NODA ◽

TOMOKO MIYANO ◽

SATOSHI TSUNEDA ◽

AKIRA HIRATA ◽

...

Keyword(s):

Microbial Community ◽

16S Rdna ◽

Gel Electrophoresis ◽

Denaturing Gradient Gel Electrophoresis ◽

Community Analysis ◽

Microbial Community Analysis ◽

Saline Wastewater ◽

Cultivation Method ◽

Gradient Gel Electrophoresis ◽

Denitrification Process

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