A star-shaped DNA probe based on strand displacement for universal and multiplexed fluorometric detection of genetic variations

2018 ◽  
Vol 185 (9) ◽  
Author(s):  
Na Liu ◽  
Kai Xu ◽  
Liquan Liu ◽  
Xin Chen ◽  
Yufan Zou ◽  
...  
The Analyst ◽  
2020 ◽  
Vol 145 (24) ◽  
pp. 8002-8007
Author(s):  
Hyobeen Lee ◽  
Dong-Min Kim ◽  
Dong-Eun Kim

Label-free fluorometric detection of influenza viral RNA by strand displacement coupled with rolling circle amplification.


1989 ◽  
Vol 17 (14) ◽  
pp. 5587-5595 ◽  
Author(s):  
Akira Murakami ◽  
Jun Tada ◽  
Koichi Yamagate ◽  
Jun Takano

2019 ◽  
Vol 92 (1) ◽  
pp. 792-798
Author(s):  
Meng Lin ◽  
Yang Qin ◽  
Xing Zhou ◽  
Na Chen ◽  
Na Liu ◽  
...  

Author(s):  
G.T. Walker ◽  
C.A. Spargo ◽  
C.M. Nycz ◽  
J.A. Down ◽  
M.S. Dey ◽  
...  

1999 ◽  
Vol 45 (6) ◽  
pp. 777-784 ◽  
Author(s):  
Michael C Little ◽  
Jeffrey Andrews ◽  
Richard Moore ◽  
Silvia Bustos ◽  
Lynda Jones ◽  
...  

Abstract Background: Amplified DNA probes provide powerful tools for the detection of infectious diseases, cancer, and genetic diseases. Commercially available amplification systems suffer from low throughput and require decontamination schemes, significant hands-on time, and specially trained laboratory staff. Our objective was to develop a DNA probe system to overcome these limitations. Methods: We developed a DNA probe system, the BDProbeTecTMET, based on simultaneous strand displacement amplification and real-time fluorescence detection. The system uses sealed microwells to minimize the release of amplicons to the environment. To avoid the need for specially trained labor, the system uses a simple workflow with predispensed reagent devices; a programmable, expandable-spacing pipettor; and the 96-microwell format. Amplification and detection time was 1 h, with potential throughput up to 564 patient results per shift. We tested 122 total patient specimens obtained from a family practice clinic with the BD ProbeTecET and the Abbott LCx® amplified system for the detection of Chlamydia trachomatis and Neisseria gonorrhoeae. Results: Based on reportable results, the BDProbeTecET results for both organisms were 100% sensitive and 100% specific relative to the LCx. Conclusions: The BDProbeTecET is an easy-to-use, high-throughput, closed amplification system for the detection of nucleic acid from C.trachomatis and N.gonorrhoeae and other organisms.


2020 ◽  
Vol 56 (92) ◽  
pp. 14397-14400
Author(s):  
Na Liu ◽  
Xuzhe Zhang ◽  
Xiaofeng Tang ◽  
Yizhou Liu ◽  
Donghui Huang ◽  
...  

A double-stranded DNA catalyzed strand displacement system was established for the detection of small genetic variations.


2021 ◽  
Vol 6 (21) ◽  
pp. 5248-5253
Author(s):  
Ying Yan ◽  
Tingting Hu ◽  
Xinying Xiang ◽  
Wenkai Li ◽  
Changbei Ma

Author(s):  
Gary Bassell ◽  
Robert H. Singer

We have been investigating the spatial distribution of nucleic acids intracellularly using in situ hybridization. The use of non-isotopic nucleotide analogs incorporated into the DNA probe allows the detection of the probe at its site of hybridization within the cell. This approach therefore is compatible with the high resolution available by electron microscopy. Biotinated or digoxigenated probe can be detected by antibodies conjugated to colloidal gold. Because mRNA serves as a template for the probe fragments, the colloidal gold particles are detected as arrays which allow it to be unequivocally distinguished from background.


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