Meta-analysis combined with syntenic metaQTL mining dissects candidate loci for maize yield

2012 ◽  
Vol 31 (3) ◽  
pp. 601-614 ◽  
Author(s):  
Yijun Wang ◽  
Zhengjin Huang ◽  
Dexiang Deng ◽  
Haidong Ding ◽  
Rong Zhang ◽  
...  
2019 ◽  
Vol 273 ◽  
pp. 62-69 ◽  
Author(s):  
Huifang Zheng ◽  
Hao Ying ◽  
Yulong Yin ◽  
Yingcheng Wang ◽  
Gang He ◽  
...  

2020 ◽  
Vol 247 ◽  
pp. 107586 ◽  
Author(s):  
Javier A. Fernandez ◽  
Jason DeBruin ◽  
Carlos D. Messina ◽  
Ignacio A. Ciampitti

2013 ◽  
Vol 54 (7) ◽  
pp. 5132 ◽  
Author(s):  
Ha Ae Bae ◽  
Richard A. D. Mills ◽  
Richard G. Lindsay ◽  
Tony Phillips ◽  
Douglas J. Coster ◽  
...  
Keyword(s):  

Agronomy ◽  
2020 ◽  
Vol 10 (8) ◽  
pp. 1149
Author(s):  
Zhibiao Wei ◽  
Hao Ying ◽  
Xiaowei Guo ◽  
Minghao Zhuang ◽  
Zhenling Cui ◽  
...  

Organic fertilizer is an effective substitute for mineral fertilizer that improves crop yield and is environmentally friendly. However, the effects of substitution often vary due to complicated interactions among the organic fertilizer substitution rate (Rs), total nutrient supply, and type of cropping system used. We performed a meta-analysis of 133 maize studies, conducted worldwide, to assess maize yield and environmental performance with substitution of mineral fertilizer with organic fertilizer. At an equivalent nitrogen (N) rate, substituting mineral fertilizer with organic fertilizer increased maize yield by 4.22%, reduced NH3 volatilization by 64.8%, reduced N leaching and runoff by 26.9%, and increased CO2 emissions by 26.8%; however, it had no significant effect on N2O or CH4 emissions. Moreover, substitution with organic fertilizer increased the soil organic carbon sequestration rate by 925 kg C ha−1 yr−1 and decreased the global warming potential by 116 kg CO2 eq ha−1 compared with mineral fertilizer treatment. The net global warming potential after organic fertilizer substitution was −3507 kg CO2 eq ha−1, indicating a net carbon sink. Furthermore, the effect of organic fertilizer substitution varied with the fertilization rate, Rs, and treatment duration. Maize yield and nitrogen use efficiency tended to increase with increasing N application rate following substitution of mineral fertilizer with organic fertilizer. Full substitution reduced N losses more than partial substitution. Further analysis revealed that the yield-optimal Rs for organic N in maize production was 40–60%. Moreover, maize yield and nitrogen use efficiency were further increased after long-term (≥ 3 years) combined use of organic and mineral fertilizers. These findings suggest that rational use of organic and mineral fertilizers improves maize productivity, increases soil organic carbon sequestration, and reduces N and C losses.


2018 ◽  
Vol 99 ◽  
pp. 138-147 ◽  
Author(s):  
Yue-Yuan Yu ◽  
Neil C. Turner ◽  
Yan-Hong Gong ◽  
Feng-Min Li ◽  
Chao Fang ◽  
...  

2021 ◽  
Author(s):  
Veronika Odintsova ◽  
Matthew Sudermann ◽  
Fiona Hagenbeek ◽  
Doretta Caramaschi ◽  
Jouke-Jan Hottenga ◽  
...  

Abstract We report the first epigenome-wide association study of left-handedness, a trait with low heritability for which epigenetic mechanisms have been proposed as an underlying etiological mechanism. A region-based meta-analysis of whole blood genome-wide DNA methylation data from two cohorts (3,914 adults) identified differentially methylated regions annotated to BLCAP (20q11.23), a negative regulator of cell growth involved in apoptosis, NNAT (20q11.23), involved in brain development, and IAH1 (2p25.1), which encodes an acyl esterase. CpGs located in proximity to the SNPs from the largest GWAS of handedness were more strongly associated with left-handedness than other differentially methylated positions. In longitudinal whole blood samples, cord blood, and buccal cells from children (N = 1,967), the association with handedness displayed moderate stability across age, but little consistency across cell types. These findings suggest new candidate loci associated with handedness.


2008 ◽  
Vol 307 (1-2) ◽  
pp. 1-19 ◽  
Author(s):  
Gudeta Sileshi ◽  
Festus K. Akinnifesi ◽  
Oluyede C. Ajayi ◽  
Frank Place

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