Development of genome-wide SSR markers in melon with their cross-species transferability analysis and utilization in genetic diversity study

2016 ◽  
Vol 36 (11) ◽  
Author(s):  
Huayu Zhu ◽  
Luqin Guo ◽  
Pengyao Song ◽  
Feishi Luan ◽  
Jianbin Hu ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Ssr Markers ◽  
Genome Wide ◽  
Genetic Diversity Study ◽  
Diversity Study

Genetic diversity study of indigenous rice accessions from northern mountainous areas of Pakistan using microsatellite/SSR markers

2021 ◽  
Vol 53 (5) ◽  
Author(s):  
Ayesha Bibi ◽  
Malik Ashiq Rabbani ◽  
Khatiba Bibi ◽  
Muneeba Fida Abbasi ◽  
Kehkishan Akbar
Keyword(s):  
Genetic Diversity ◽  
Ssr Markers ◽  
Mountainous Areas ◽  
Genetic Diversity Study ◽  
Diversity Study

scholarly journals SSR and ISSR markers in assessing genetic diversity in Gallus gallus domesticus: a quantitative analysis of scientific production

2020 ◽  
Vol 50 (7) ◽  
Author(s):  
Mauricio Sérgio Ferreira Soares da Silva Junior ◽  
Alberto Alexandre de Sousa Borges ◽  
Sárvia Rafaelly Nunes Santos ◽  
Vanessa Gomes de Moura ◽  
Geice Ribeiro da Silvana ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Ssr Markers ◽  
Rural Areas ◽  
Genetic Basis ◽  
Issr Markers ◽  
Poultry Meat ◽  
Scientific Publications ◽  
Inbreeding Rate ◽  
Genetic Diversity Study ◽  
Diversity Study

ABSTRACT: Poultry meat is a major source of animal protein in the world. Research indicates a high inbreeding rate derived from a relative absence of heterozygous subpopulations of chicken from different suppliers. Molecular markers can provide information for the genetic basis of chicken consumed in rural areas and help establishing a chicken database for product quality and warranty. The bibliometric research, comprises between 1994 and 2018, from five previously selected databases: Google Scholar, PubMed, ScienceDirect, Scopus and Web of Science, using the following descriptors: ‘microsatellites’, ‘SSR’, ‘ISSR’, ‘genetic variability’ and ‘genetic diversity’, all of them coupled to ‘chicken’ and/or ‘birds’ results in 66 scientific publications. The publications were then categorized according to their titles to the use of ISSR or SSR markers. They were also addressed by countries according first author cited. The publications data appointed that countries with the height production of poultry meat and hens are the most interested in the genetic diversity study of these species. The SSR markers, due to its more specific characteristic, are more frequently applied to genetic diversity assignment, compared to ISSR.

scholarly journals Assessment of Genetic Diversity in Wild Rice of Eastern India Using SSR Markers

2017 ◽  
Vol 9 (6) ◽  
pp. 239
Author(s):  
Rosalin Swain ◽  
Shibani Mohapatra ◽  
Pritesh Roy ◽  
D. Swain ◽  
O. N. Singh ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Ssr Markers ◽  
Wild Rice ◽  
West Bengal ◽  
Cultivated Rice ◽  
Morphological Variations ◽  
Aa Genome ◽  
Clustering Pattern ◽  
Genetic Diversity Study ◽  
Diversity Study

Wild rice is an important reservoir of valuable and useful genes. O. rufipogon and O. nivara contain AA genome andare the progenitor of cultivated rice which makes them compatible with the cultivated rice for cross breeding to incorporate the genes for stress tolerance. SSR markers were used to assess the extent of diversity of 26 accessions of O. rufipogon and O. nivara collected from different districts of Orissa, West Bengal and Tripura. The Principal Co-ordinate Analysis (PCA) clearly indicates the clustering pattern and inter-relationships among different accessions. Mantel Z-testexhibitedacorrelation between cophenetic matrix and Jaccards’ similarity coefficient in 26 accessions and 4 CRRI released varieties using 54 STMS (SSR) markers which showed significant correlation (r = 0.8249) between them. O. nivara accessions and O. rufipogon accessions were grouped different clusters. O. nivara collected from Midnapore is placed in different cluster. It is concluded that the SSR markers used were found to be equally informative for the genetic diversity study between and among the accessions of two wild species such as O. rufipogon and O. nivara collected from different locations of Orissa, West Bengal & Tripura. Highlysignificant morphological variations were also observed among O. nivara and O. rufipogon accessions.

scholarly journals Isolation and Characterization of Microsatellite Loci of Clarias macrocephalus and Their Application to Genetic Diversity Study

1999 ◽  
Vol 65 (4) ◽  
pp. 520-526 ◽  
Author(s):  
Uthairat Na-Nakorn ◽  
Nobuhiko Taniguchi ◽  
Estu Nugroho ◽  
Shingo Seki ◽  
Wongpathom Kamonrat
Keyword(s):  
Genetic Diversity ◽  
Microsatellite Loci ◽  
Isolation And Characterization ◽  
Clarias Macrocephalus ◽  
Genetic Diversity Study ◽  
Diversity Study

A genetic diversity study of silkworm using cleaved amplified polymorphic sequence (CAPS) markers

2006 ◽  
Vol 34 (12) ◽  
pp. 868-874 ◽  
Author(s):  
Jianhua Huang ◽  
Muwang Li ◽  
Yong Zhang ◽  
Wenbin Liu ◽  
Minghui Li ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Cleaved Amplified Polymorphic Sequence ◽  
Caps Markers ◽  
Genetic Diversity Study ◽  
Diversity Study

Efficiency of phenotypic and DNA markers for a genetic diversity study of alfalfa

2010 ◽  
Vol 46 (11) ◽  
pp. 1314-1319 ◽  
Author(s):  
M. Tucak ◽  
S. Popović ◽  
T. Čupić ◽  
S. Grljušić ◽  
V. Meglič ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Dna Markers ◽  
Genetic Diversity Study ◽  
Diversity Study
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