mitochondrial cox1
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2021 ◽  
Vol 773 ◽  
pp. 19-60
Author(s):  
Yuri I. Kantor ◽  
Nicolas Puillandre

The genus Sibogasyrinx has to date included only four species of rare deep-water Conoidea, each known from few specimens. In shell characters it strongly resembles three distantly-related genera, two of which, Comitas and Leucosyrinx, belong to a different family, the Pseudomelatomidae. A molecular phylogenetic analysis of a large amount of material of Conoidea has revealed the existence of much additional undescribed diversity within Sibogasyrinx from the central Indo-Pacific and temperate Northern Pacific. Based on partial sequences of the mitochondrial cox1 gene and morphological characters of 54 specimens, 10 species hypotheses are proposed, of which six are described as new species: S. subula sp. nov., S. lolae sp. nov., S. maximei sp. nov., S. clausura sp. nov., S. pagodiformis sp. nov. and S. elbakyanae Kantor, Puillandre & Bouchet sp. nov. One of the previously described species was absent in our material. Most of the new species are very similar and are compared to Leucosyrinx spp. Species of Sibogasyrinx are unique among Conoidea on account of the high intrageneric variability in radular morphology. Three distinct radula types are found within Sibogasyrinx, two of which are confined to highly supported subclades.


2021 ◽  
Vol 26 (4) ◽  
pp. 818-828
Author(s):  
Philipp E. Chetverikov ◽  
Denis S. Fedorov ◽  
Viktoria Yu. Letukhova ◽  
Anna E. Romanovich

We report on one new cecidophyine species, Cecidophyes fibigiae n. sp. from Fibigia clypeata (L.) Medik. (Brassicaceae) and three new combinations and seven new records of phyllocoptine mites in Crimea: Abacarus hystrix (Nalepa 1896) from Elytrigia elongata (Host) Nevski (Poaceae), Aculodes cf holcusi Skoracka 2004 from Aegilops biuncialis Vis. (Poaceae), Aculops coronillae (Canestrini & Massalongo, 1893) n. comb. from Securigera varia (L.) Lassen (Fabaceae), Aculops longifilis (Canestrini 1891) n. comb. from Onobrychis miniata (Kit.) DC. (Fabaceae), Aculus sp. from Galium humifusum M.Bieb. (Rubiaceae), Anthocoptes recki (Bagdasarian, 1972) from Pistacia atlantica subsp. mutica (Fisch. & C.A. Mey.) (Anacardiaceae), and Anthocoptes thymi (Nalepa) n. comb. from Thymus callieri Borb. ex Velen. (Lamiaceae). Partial mitochondrial Cox1 sequences (about 1150 bp) of all found species were obtained (GB accession numbers MW439274–MW439282).


2021 ◽  
Vol 24 (2) ◽  
pp. 251-260
Author(s):  
M. Valizadeh ◽  
F. Tahvildar Biderouni ◽  
S. R. Shahrokhi ◽  
M. Ghanimatdan ◽  
A. R. Nagahi

Toxocara canis and Toxascaris leonina are the most important ascaridoid nematodes of the family Toxocaridae. The present study was aimed to characterisation and analysis of genetic variation within and among T. canis and T. leonina isolates obtained from Iran by sequencing partial mitochondrial cytochrome c oxidase subunit 1 (pcox1) and partial NADH dehydrogenase subunit 1 (pnad1) genes. A total number of 134 adult nematodes belonging to Toxocaridae family were collected from stray dogs in Alborz province, Iran during 2015 and 2016. Polymerase chain reaction (PCR) was performed and products were sequenced. Sequences of two mitochondrial cox1 and nad1 genes were compared with other sequences in the GenBank, while multiple sequences alignment analysis was performed using the Bioedit and MEGA6 software and phylogenetic tree was plotted. For all isolates, amplicons of about 450 and 350 base pairs (bp) were successfully produced by PCR for cox1 and nad1, respectively. All sequences of T. canis isolates from present study were 100% homologous across the nad1 gene but not in the cox1 gene. The results indicate that the PCR method based on sequence of cox1 and nad1 genes is a suitable technique for the differentiation of T. canis and T. leonina species and that mtDNA regions could be used as genetic markers for the identification and differentiation of Toxocara species.


2020 ◽  
Vol 85 ◽  
pp. 104481 ◽  
Author(s):  
Mughees Aizaz Alvi ◽  
John Asekhaen Ohiolei ◽  
Muhammad Saqib ◽  
Li Li ◽  
Nehaz Muhammad ◽  
...  

Author(s):  
Mojtaba Shahnazi ◽  
Maryam Habibvand ◽  
Morteza Ghanbari Johkool ◽  
Elham Hajialilo ◽  
Meysam Sharifdini ◽  
...  

Introduction: Hydatidiosis is a serious parasitic disease in humans and livestock, worldwide. Echinococcus granulosus shows notable genetic variation among intermediate hosts. Several genotypes of the worm have been reported from different parts of Iran, but no information over the parasite genotypes status in the study region is available. The current study investigated the presence of different genotypes of E. granulosus in the livestock of Qazvin, Iran, by sequencing the mitochondrial Cox1 genes. Methodology: One hundred twenty E. granulosus isolates, including 30 from goats, 40 from cattle and 50 from sheep were collected from the slaughterhouses in Qazvin province. Mitochondrial Cox1 gene region was amplified by PCR and 30 isolates were sequenced. Phylogenetic analysis was done by using the MEGA 7.0 software. Morphological analysis was performed on rostellar hook length of protoscoleces. Result: All isolates were identified as E. granulosus sensu stricto (G1-G3 complex) among 17% of isolates clarified as G3 genotypes. G1 was the predominant genotype among the specimens. No significant difference between the rostellar hooks measurements of different genotypes was observed. Conclusion: Our findings confirmed the presence of E. granulosus sensu stricto in the region although further studies are required to determine the haplotype diversity of E. granulosus using different mitochondrial and nuclear genes.


2020 ◽  
Vol 119 (10) ◽  
pp. 3339-3345
Author(s):  
Qiang Zhou ◽  
Zhan-Xin Wang ◽  
Jia-Meng Tao ◽  
Jian-Ping Qin ◽  
Jun-Peng Lu ◽  
...  

Phytotaxa ◽  
2020 ◽  
Vol 451 (1) ◽  
pp. 63-72
Author(s):  
GA HUN BOO ◽  
TAE OH CHO ◽  
ALISON R. SHERWOOD ◽  
SUNG MIN BOO ◽  
MUTUE TOYOTA FUJII

Wilsonosiphonia is a newly described marine algal genus with three species. The genus was previously confused with the widely distributed taxon Polysiphonia, and because of this, the taxonomy and distribution of Wilsonosiphonia is likely underestimated. We report the discovery of a minute filamentous red alga, Wilsonosiphonia fujiae (Rhodophyta) in the Maldives Islands, a taxon which was considered endemic to Brazil. Specimens were collected at Fulhadoo, Goidhoo Atoll and Dhidhdhoo Islands, South Ari Atoll, which are ca. 160 km apart, during January and July, 2019, respectively. Thalli formed dense patches on the upper intertidal in regions of shaded rock. Both mitochondrial cox1 and plastid rbcL sequencing confirmed the occurrence of W. fujiae in the Maldives, which is also in agreement with morphological observations. Based on the low pairwise divergences of COI-5P and rbcL sequences between the Maldives and Brazil specimens, we suggest that W. fujiae is a recently introduced yet cryptogenic species in the Maldives. Additionally, as a result of our phylogenetic analyses, it became evident that sequences from the Hawaiian Islands, which were listed as members of the genus Polysiphonia, represent species-level diversity within the genus Wilsonosiphonia. Based on both morphological characteristics and the COI-5P phylogeny, we here reinstate Polysiphonia rhizoidea from Hawaiʻi and transfer it to Wilsonosiphonia, as W. rhizoidea comb. nov.


Gene Reports ◽  
2020 ◽  
Vol 19 ◽  
pp. 100616
Author(s):  
Seyed-Reza Mirbadie ◽  
Masoomeh Zivdari ◽  
Hamed Kalani ◽  
Mohammad-Reza Vafaei ◽  
Shahrokh Izadi ◽  
...  

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