Rhabdias esculentarum n. sp. (Nematoda: Rhabdiasidae) from green frogs of the Rana esculenta species complex in Italy: molecular evidence, morphological description and genetic differentiation from its congeners in frogs and toads

2012 ◽  
Vol 82 (2) ◽  
pp. 131-146 ◽  
Author(s):  
Paolo Cipriani ◽  
Simonetta Mattiucci ◽  
Michela Paoletti ◽  
Mario Santoro ◽  
Giuseppe Nascetti
Keyword(s):  
Genetic Differentiation ◽  
Species Complex ◽  
Rana Esculenta ◽  
Morphological Description ◽  
Molecular Evidence

New Paracalanidae species from the central coast of Brazil: morphological description and molecular evidence

2021 ◽  
Vol 51 (3) ◽  
Author(s):  
Flavia Guerra Vieira-Menezes ◽  
Cristina de Oliveira Dias ◽  
Astrid Cornils ◽  
Rosane Silva ◽  
Sérgio Luiz Costa Bonecker
Keyword(s):  
Morphological Description ◽  
Molecular Evidence ◽  
Central Coast

scholarly journals Unravelling the Potamonautes lirrangensis (Rathbun, 1904) species complex (Potamoidea: Potamonautidae), with the description of two new species

2021 ◽  
Vol 744 ◽  
Author(s):  
Neil Cumberlidge ◽  
Emily Johnson ◽  
Paul F. Clark ◽  
Martin J. Genner
Keyword(s):  
Species Complex ◽  
Central Africa ◽  
Taxonomic Status ◽  
Lake Malawi ◽  
Molecular Evidence ◽  
Similar Species ◽  
Freshwater Crab ◽  
Distribution Maps ◽  
Congo River ◽  
Two New Species

The taxonomic status of the widely distributed freshwater crab Potamonautes lirrangensis (Rathbun, 1904) sensu lato is revised because morphological and molecular evidence indicates that this taxon is a complex comprising more than one species. Four taxa are now recognized: Potamonautes lirrangensis (Rathbun, 1904) s. str. and P. kisangani sp. nov. from the Middle Congo River in Central Africa, P. amosae sp. nov. from the drainages of Lakes Kivu and Tanganyika, and P. orbitospinus (Cunnington, 1907) from Lake Malawi which had been previously synonymised with P. lirrangensis s. lat. Diagnoses, illustrations and distribution maps are provided for each of these taxa and they are compared to similar species from Central and Southern Africa.

Phylogenetics of the mycoheterotrophic genus Thismia (Thismiaceae: Dioscoreales) with a focus on the Old World taxa: delineation of novel natural groups and insights into the evolution of morphological traits

2020 ◽  
Vol 193 (3) ◽  
pp. 287-315 ◽  
Author(s):  
Ekaterina A Shepeleva ◽  
Mikhail I Schelkunov ◽  
Michal Hroneš ◽  
Michal Sochor ◽  
Martin Dančák ◽  
...  
Keyword(s):  
Significant Proportion ◽  
Morphological Diversity ◽  
Taxonomic Revision ◽  
Morphological Characters ◽  
Morphological Description ◽  
Molecular Evidence ◽  
Ancestral State ◽  
Old World ◽  
Molecular Phylogenetic ◽  
Floral Characters

Abstract Thismia is a genus of > 80 mycoheterotrophic species characterized by a peculiar appearance and complex floral morphology. A significant proportion of the species and morphological diversity of Thismia has only been uncovered in the past two decades, and new discoveries continue to be made. Given that many new data have recently become available, and the most comprehensive taxonomic revision of the genus from 1938 addresses less than half of the currently known species, previous hypotheses for species relationships and infrageneric taxonomic classification in Thismia was in need of review. Extensive molecular phylogenetic studies of Thismia at the genus level have never been presented. We investigate the phylogenetic relationships of 41 species (and one variety) of Thismia from the Old World. Our study comprises 68 specimens (for 28 of which the data were newly generated), including outgroup taxa broadly representing Thismiaceae (= Burmanniaceae p.p. sensuAPG IV, 2016), and is based on two nuclear and one mitochondrial marker. We use maximum likelihood and Bayesian inference to infer relationships among the taxa. We also constructed a morphological dataset of 12 mostly floral characters, comparing these characters to hypotheses based on molecular evidence to identify putative synapomorphies for major clades and to discuss hypotheses regarding the evolution of structural traits in the genus. Our analyses indicate that the majority of currently accepted infrageneric taxa of Thismia are polyphyletic. We find support for the monophyly of the Old World group, in which we recognize five well-supported lineages (clades); the only New World species studied appears to be related to the Neotropical genus Tiputinia. Ancestral state reconstructions demonstrate that the evolution of most morphological characters was homoplastic, but we identify characters that provide each of the five clades of Old World Thismia with a unique morphological description. The geographical distribution of the species under study is also shown to be consistent with the major clades. Our investigation provides a phylogenetic basis for the development of a novel sectional classification of Thismia reflecting morphological and geographical traits.

scholarly journals Revision of Bairdiella (Sciaenidae: Perciformes) from the western South Atlantic, with insights into its diversity and biogeography

2019 ◽  
Vol 17 (1) ◽  
Author(s):  
Alexandre Pires Marceniuk ◽  
Eduardo Garcia Molina ◽  
Rodrigo Antunes Caires ◽  
Matheus Marcos Rotundo ◽  
Wolmar Benjamin Wosiacki ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Relationships ◽  
Species Complex ◽  
Atlantic Coast ◽  
Geographic Range ◽  
Molecular Evidence ◽  
Western Atlantic ◽  
Taxonomic History ◽  
Inshore Waters ◽  
A New Species

ABSTRACT The sciaenid genus Bairdiella comprises a group of relatively small fishes found in inshore waters and estuaries of the western Atlantic and eastern Pacific. Despite recent analyses of the phylogenetic relationships of Bairdiella, there has been no comprehensive revision of the alpha taxonomy of the species of the genus. Bairdiella ronchus from the western Atlantic, has a complex taxonomic history, with four junior synonyms recognized. Based on morphological and molecular evidence, this study indicates that B. ronchus represents a species complex. The species is therefore redescribed and its geographic range is redefined. Bairdiella veraecrucis, which is currently recognized as a junior synonym of B. ronchus, is revalidated, and a new species of the genus is described from the Atlantic coast of Brazil. Finally, inferences are made on the diversity and biogeography of the B. ronchus species complex.

Contrasting evolutionary processes drive morphological and genetic differentiation in a subtropical fir (Abies, Pinaceae) species complex

2019 ◽  
Author(s):  
Jorge Cruz-Nicolás ◽  
Gustavo Giles-Pérez ◽  
Eréndira González-Linares ◽  
Julia Múgica-Gallart ◽  
Andrés Lira-Noriega ◽  
...  
Keyword(s):  
Genetic Differentiation ◽  
Population Size ◽  
Species Complex ◽  
Isolation By Distance ◽  
Morphological Differentiation ◽  
Resin Duct ◽  
Evolutionary Force ◽  
Ssr Loci ◽  
Selective Forces ◽  
Species Descriptions

Abstract Interacting stochastic and selective forces drive population and species divergence. Such interaction may generate contrasting clines between genetic and phenotypic factors, which can be related to either geographical or environmental variation depending on the predominant evolutionary force (which in its turn is partly determined by population size). Here, we investigated whether the morphological and genetic differentiation across a species complex in Abies in central Mexico fits isolation by distance (IBD) or isolation-by-adaptation (IBA) frameworks. This complex includes two species (A. religiosa and A. flinckii) with discernible morphological and environmental differences and dissimilar range sizes. After comparing variation at nuclear SSR loci and diagnostic morphological traits of needles with the climate variables contributing to ecological differentiation, we found that the widely distributed A. religiosa has more genetic diversity and is morphologically more heterogeneous than the geographically restricted A. flinckii. Morphological differentiation at three physiologically important traits (needle thickness, number of stomata rows and location of the resin duct) is significantly correlated with geography in A. flinckii (indicative of IBD), but is significantly associated with climate variation in A. religiosa (suggesting IBA). In agreement with quantitative genetics theory, PST (phenotypic differentiation)-G’ST (genetic differentiation) comparisons indicate contrasting contributions of putatively adaptive (A. religiosa) and stochastic (A. flinckii) factors to the morphological differentiation of species related to their population size. The integration of such quantitative genetic/evolutionary aspects may reinforce species descriptions and help in disentangling resilient taxonomic discordance.

Integrative data helps the assessment of a butterfly within the Udranomia kikkawai species complex (Lepidoptera: Hesperiidae): Immature stages, natural history, and molecular evidence

2017 ◽  
Vol 266 ◽  
pp. 169-176 ◽  
Author(s):  
Alexandra Bächtold ◽  
Lucas A. Kaminski ◽  
Luiza M. Magaldi ◽  
Paulo S. Oliveira ◽  
Kleber Del-Claro ◽  
...  
Keyword(s):  
Natural History ◽  
Species Complex ◽  
Molecular Evidence ◽  
Immature Stages

scholarly journals Long-Term Rasamsonia argillacea Complex Species Colonization Revealed by PCR Amplification of Repetitive DNA Sequences in Cystic Fibrosis Patients

2016 ◽  
Vol 54 (11) ◽  
pp. 2804-2812 ◽  
Author(s):  
Abdelmounaim Mouhajir ◽  
Olivier Matray ◽  
Sandrine Giraud ◽  
Laurent Mély ◽  
Christophe Marguet ◽  
...  
Keyword(s):  
Cystic Fibrosis ◽  
Repetitive Dna ◽  
Dna Sequences ◽  
Species Complex ◽  
Pcr Amplification ◽  
Patient Specific ◽  
Molecular Evidence ◽  
Repetitive Dna Sequences ◽  
Complex Species ◽  
Content Type

The aim of this work was to document molecular epidemiology of Rasamsonia argillacea species complex isolates from cystic fibrosis (CF) patients. In this work, 116 isolates belonging to this species complex and collected from 26 CF patients and one patient with chronic granulomatous disease were characterized using PCR amplification assays of repetitive DNA sequences and electrophoretic separation of amplicons (rep-PCR). Data revealed a clustering consistent with molecular species identification. A single species was recovered from most patients. Rasamsonia aegroticola was the most common species, followed by R. argillacea sensu stricto and R. piperina , while R. eburnea was not identified. Of 29 genotypes, 7 were shared by distinct patients while 22 were patient specific. In each clinical sample, most isolates exhibited an identical genotype. Genotyping of isolates recovered from sequential samples from the same patient confirmed the capability of R. aegroticola and R. argillacea isolates to chronically colonize the airways. A unique genotype was recovered from two siblings during a 6-month period. In the other cases, a largely dominant genotype was detected. Present results which support the use of rep-PCR for both identification and genotyping for the R. argillacea species complex provide the first molecular evidence of chronic airway colonization by these fungi in CF patients.

Cortinarius rapaceoides, a new record for Turkey

Mycotaxon ◽  
2020 ◽  
Vol 135 (3) ◽  
pp. 559-568
Author(s):  
Meryem Senay Şengul Demirak ◽  
Hakan Işik
Keyword(s):  
Phylogenetic Relationships ◽  
Internal Transcribed Spacer ◽  
New Record ◽  
Sequence Data ◽  
Large Subunit ◽  
Morphological Description ◽  
Molecular Evidence

A macrofungus collected from Akbelen village in Tokat has been identified based on molecular evidence and morphology as Cortinarius rapaceoides, a new record from Turkey. Sequence data generated from the nuclear ribosomal internal transcribed spacer and ribosomal large subunit regions were deposited in GenBank and used to determine phylogenetic relationships within Cortinarius subg. Phlegmacium. A morphological description, illustrations, and phylogeny of the Turkish C. rapaceoides are provided.

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