A graph centrality-based approach for candidate gene prediction for type 1 diabetes

Author(s):  
N. B. Thummadi ◽  
E. Vishnu ◽  
E. V. Subbiah ◽  
P. Manimaran
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Author(s):  
Ming-Shiu Hung ◽  
Philip Avner ◽  
Ute Christine Rogner

Diabetes ◽  
2014 ◽  
Vol 63 (7) ◽  
pp. 2516-2527 ◽  
Author(s):  
L. Marroqui ◽  
I. Santin ◽  
R. S. Dos Santos ◽  
L. Marselli ◽  
P. Marchetti ◽  
...  

2001 ◽  
Vol 38 (4) ◽  
pp. 191-192 ◽  
Author(s):  
Z. M. Larsen ◽  
A. D. Angelo ◽  
M. Cattaneo ◽  
J. Nerup ◽  
I. Biunno ◽  
...  

Diabetes ◽  
2011 ◽  
Vol 60 (12) ◽  
pp. 3279-3288 ◽  
Author(s):  
I. Santin ◽  
F. Moore ◽  
M. L. Colli ◽  
E. N. Gurzov ◽  
L. Marselli ◽  
...  

2006 ◽  
Vol 1079 (1) ◽  
pp. 41-46 ◽  
Author(s):  
S. NOSO ◽  
H. IKEGAMI ◽  
T. FUJISAWA ◽  
Y. KAWABATA ◽  
K. ASANO ◽  
...  

2019 ◽  
Vol 21 (1) ◽  
pp. 71-77 ◽  
Author(s):  
Janice M. Nieves-Bonilla ◽  
Badr Kiaf ◽  
Cornelia Schuster ◽  
Stephan Kissler

2020 ◽  
Author(s):  
Ada Admin ◽  
Tina Fløyel ◽  
Kira Meyerovich ◽  
Michala C. Prause ◽  
Simranjeet Kaur ◽  
...  

The single nucleotide polymorphism rs7804356 located in the Src kinase-associated phosphoprotein 2<i> </i>(SKAP2) gene<i> </i>is associated with type 1 diabetes (T1D) suggesting <i>SKAP2</i> as a causal candidate gene. The objective of the study was to investigate if SKAP2 has a functional role in the β-cells in relation to T1D. In a cohort of children with newly diagnosed T1D, rs7804356 predicted glycaemic control and residual β-cell function during first year after diagnosis. In INS-1E cells and rat and human islets, pro-inflammatory cytokines reduced the content of SKAP2. Functional studies revealed that knockdown of SKAP2 aggravated cytokine-induced apoptosis in INS-1E cells and primary rat b-cells, suggesting an anti-apoptotic function of SKAP2. In support of this, overexpression of SKAP2 afforded protection against cytokine-induced apoptosis which correlated with reduced nuclear content of S536-phosphorylated NFκB subunit p65, lower nitric oxide production and diminished C/EBP-homologues protein (CHOP) expression indicative of decreased endoplasmic reticulum stress. Knockdown of CHOP partially counteracted the increase in cytokine-induced apoptosis caused by SKAP2 knockdown. In conclusion, our results suggest that SKAP2 controls β-cell sensitivity to cytokines possibly by affecting the NFκB-iNOS-ER stress pathway.


2020 ◽  
Author(s):  
Ada Admin ◽  
Tina Fløyel ◽  
Kira Meyerovich ◽  
Michala C. Prause ◽  
Simranjeet Kaur ◽  
...  

The single nucleotide polymorphism rs7804356 located in the Src kinase-associated phosphoprotein 2<i> </i>(SKAP2) gene<i> </i>is associated with type 1 diabetes (T1D) suggesting <i>SKAP2</i> as a causal candidate gene. The objective of the study was to investigate if SKAP2 has a functional role in the β-cells in relation to T1D. In a cohort of children with newly diagnosed T1D, rs7804356 predicted glycaemic control and residual β-cell function during first year after diagnosis. In INS-1E cells and rat and human islets, pro-inflammatory cytokines reduced the content of SKAP2. Functional studies revealed that knockdown of SKAP2 aggravated cytokine-induced apoptosis in INS-1E cells and primary rat b-cells, suggesting an anti-apoptotic function of SKAP2. In support of this, overexpression of SKAP2 afforded protection against cytokine-induced apoptosis which correlated with reduced nuclear content of S536-phosphorylated NFκB subunit p65, lower nitric oxide production and diminished C/EBP-homologues protein (CHOP) expression indicative of decreased endoplasmic reticulum stress. Knockdown of CHOP partially counteracted the increase in cytokine-induced apoptosis caused by SKAP2 knockdown. In conclusion, our results suggest that SKAP2 controls β-cell sensitivity to cytokines possibly by affecting the NFκB-iNOS-ER stress pathway.


Diabetes ◽  
2009 ◽  
Vol 58 (6) ◽  
pp. 1283-1291 ◽  
Author(s):  
F. Moore ◽  
M. L. Colli ◽  
M. Cnop ◽  
M. I. Esteve ◽  
A. K. Cardozo ◽  
...  

Diabetologia ◽  
2004 ◽  
Vol 47 (7) ◽  
pp. 1273-1277 ◽  
Author(s):  
T. Gylvin ◽  
R. Nolsøe ◽  
T. Hansen ◽  
E. M. D. Nielsen ◽  
R. Bergholdt ◽  
...  

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