PCR-based simple sequence repeat markers for diagnostic identification of major clonal lineages of Puccinia striiformis f. sp. tritici and related stripe rust pathogens in Australia

2014 ◽  
Vol 44 (1) ◽  
pp. 97-103 ◽  
Author(s):  
J. Bailey ◽  
H. Karaoglu ◽  
C. R. Wellings ◽  
R. F. Park
Keyword(s):  
Stripe Rust ◽  
Simple Sequence Repeat ◽  
Puccinia Striiformis ◽  
Sequence Repeat ◽  
Simple Sequence Repeat Markers ◽  
Rust Pathogens ◽  
Simple Sequence

scholarly journals Grass Hosts Harbor More Diverse Isolates of Puccinia striiformis Than Cereal Crops

2016 ◽  
Vol 106 (4) ◽  
pp. 362-371 ◽  
Author(s):  
P. Cheng ◽  
X. M. Chen ◽  
D. R. See
Keyword(s):  
Ssr Markers ◽  
Stripe Rust ◽  
Simple Sequence Repeat ◽  
Puccinia Striiformis ◽  
The United States ◽  
Grass Species ◽  
Cereal Crops ◽  
Sequence Repeat ◽  
Grass Hosts ◽  
Simple Sequence

Puccinia striiformis causes stripe rust on cereal crops and many grass species. However, it is not clear whether the stripe rust populations on grasses are able to infect cereal crops and how closely they are related to each other. In this study, 103 isolates collected from wheat, barley, triticale, rye, and grasses in the United States were characterized by virulence tests and simple sequence repeat (SSR) markers. Of 69 pathotypes identified, 41 were virulent on some differentials of wheat only, 10 were virulent on some differentials of barley only, and 18 were virulent on some differentials of both wheat and barley. These pathotypes were clustered into three groups: group one containing isolates from wheat, triticale, rye, and grasses; group two isolates were from barley and grasses; and group three isolates were from grasses and wheat. SSR markers identified 44 multilocus genotypes (MLGs) and clustered them into three major molecular groups (MG) with MLGs in MG3 further classified into three subgroups. Isolates from cereal crops were present in one or more of the major or subgroups, but not all, whereas grass isolates were present in all of the major and subgroups. The results indicate that grasses harbor more diverse isolates of P. striiformis than the cereals.

scholarly journals Screening for simple sequence repeat markers in Puccinia striiformis tritici based on genomic sequence

2015 ◽  
Vol 16 (8) ◽  
pp. 727-732 ◽  
Author(s):  
Gang-ming Zhan ◽  
Fu-ping Wang ◽  
Huai-yong Luo ◽  
Shu-chang Jiang ◽  
Wen-ming Zheng ◽  
...  
Keyword(s):  
Simple Sequence Repeat ◽  
Genomic Sequence ◽  
Puccinia Striiformis ◽  
Sequence Repeat ◽  
Simple Sequence Repeat Markers ◽  
Simple Sequence

scholarly journals Development and characterization of non-coding RNA based simple sequence repeat markers in Capsicum species

Genomics ◽  
2020 ◽  
Vol 112 (2) ◽  
pp. 1554-1564 ◽  
Author(s):  
Vandana Jaiswal ◽  
Abdul Rawoof ◽  
Meenakshi Dubey ◽  
Sushil Satish Chhapekar ◽  
Vineet Sharma ◽  
...  
Keyword(s):  
Simple Sequence Repeat ◽  
Sequence Repeat ◽  
Simple Sequence Repeat Markers ◽  
Non Coding Rna ◽  
Capsicum Species ◽  
Simple Sequence

Development of simple sequence repeat markers and construction of a high-density linkage map of Capsicum annuum

2013 ◽  
Vol 31 (4) ◽  
pp. 909-920 ◽  
Author(s):  
Toru Sugita ◽  
Yukari Semi ◽  
Hiromasa Sawada ◽  
Yumi Utoyama ◽  
Yuko Hosomi ◽  
...  
Keyword(s):  
Linkage Map ◽  
Capsicum Annuum ◽  
Simple Sequence Repeat ◽  
High Density ◽  
Sequence Repeat ◽  
Simple Sequence Repeat Markers ◽  
High Density Linkage Map ◽  
Simple Sequence
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