Interaction of the dibutylchloromethyltin chloride binding site with the carbodiimide binding site in mitochondria

1980 ◽  
Vol 96 (3) ◽  
pp. 1103-1108 ◽  
Author(s):  
M.D. Partis ◽  
E. Bertoli ◽  
D.E. Griffiths ◽  
A. Azzi
Biochemistry ◽  
1993 ◽  
Vol 32 (9) ◽  
pp. 2125-2130 ◽  
Author(s):  
Zhiyan Wang ◽  
Ana B. Asenjo ◽  
Daniel D. Oprian

1995 ◽  
Vol 309 (2) ◽  
pp. 403-410 ◽  
Author(s):  
J K Grady ◽  
A B Mason ◽  
R C Woodworth ◽  
N D Chasteen

The effects of site-directed mutation and salt on the iron(III)-binding site of the recombinant half-molecule of the N-terminal lobe (hTf/2N) of human transferrin was studied by EPR spectroscopy. Changes were observed in the EPR spectra of all variants investigated (D63S, D63C, G65R, K206Q, H207E, H249E, H249Q, K296E and K296Q) compared with that of the wild-type protein. The most pronounced changes in the metal site were caused by replacement of the coordinating residues, Asp-63 and His-249, and the non-coordinating residue Lys-296, which is located in the hinge region of the iron-binding cleft. The EPR spectral changes from replacement of other non-coordinating residues were more subtle, indicating small changes in Fe3+ coordination to the protein. The EPR spectrum of variant G65R suggests that it adopts two distinct conformations in solution, one in which the two domains forming the iron-binding cleft are closed and one in which they are open; in the latter instance Asp-63 is no longer coordinated to the Fe3+. Chloride-binding studies on hTf/2N, K206Q, H207E, K296Q and K296E showed similar binding isotherms, indicating that none of the hinge region residues replaced, i.e. Lys-206, His-207 or Lys-296, are the sites of chloride binding. The results show that the coordination environment of the Fe3+ is sensitive to structural changes from site-directed mutation of both remote and coordinated residues and also to chloride-binding and ionic strength effects.


Biochemistry ◽  
2005 ◽  
Vol 44 (36) ◽  
pp. 12022-12029 ◽  
Author(s):  
Hui Yu ◽  
Constantino P. Aznar ◽  
Xianzhong Xu ◽  
R. David Britt

2010 ◽  
Vol 286 (4) ◽  
pp. 2834-2842 ◽  
Author(s):  
Sotiria Tavoulari ◽  
Ahsan N. Rizwan ◽  
Lucy R. Forrest ◽  
Gary Rudnick

Biochemistry ◽  
1992 ◽  
Vol 31 (16) ◽  
pp. 4111-4121 ◽  
Author(s):  
Jeffrey S. Kavanaugh ◽  
Paul H. Rogers ◽  
David A. Case ◽  
Arthur Arnone

2012 ◽  
Vol 215 (3) ◽  
pp. 518-525 ◽  
Author(s):  
A. V. Signore ◽  
J. Stetefeld ◽  
R. E. Weber ◽  
K. L. Campbell

Author(s):  
Madeleine Schreiner ◽  
Ramona Schlesinger ◽  
Joachim Heberle ◽  
Hartmut H. Niemann

The transmembrane pump halorhodopsin in halophilic archaea translocates chloride ions from the extracellular to the cytoplasmic side upon illumination. In the ground state a tightly bound chloride ion occupies the primary chloride-binding site (CBS I) close to the protonated Schiff base that links the retinal chromophore to the protein. The light-triggeredtrans–cisisomerization of retinal causes structural changes in the protein associated with movement of the chloride ion. In reverse, chemical depletion of CBS I inNatronomonas pharaonishalorhodopsin (NpHR) through deprotonation of the Schiff base results in conformational changes of the protein: a state thought to mimic late stages of the photocycle. Here, crystals ofHalobacterium salinarumhalorhodopsin (HsHR) were soaked at high pH to provoke deprotonation of the Schiff base and loss of chloride. The crystals changed colour from purple to yellow and the occupancy of CBS I was reduced from 1 to about 0.5. In contrast toNpHR, this chloride depletion did not cause substantial conformational changes in the protein. Nevertheless, two observations indicate that chloride depletion could eventually result in structural changes similar to those found inNpHR. Firstly, the partially chloride-depleted form ofHsHR has increased normalizedBfactors in the region of helix C that is close to CBS I and changes its conformation inNpHR. Secondly, prolonged soaking ofHsHR crystals at high pH resulted in loss of diffraction. In conclusion, the conformation of the chloride-free protein may not be compatible with this crystal form ofHsHR despite a packing arrangement that hardly restrains helices E and F that presumably move during ion transport.


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