New approach to the kinetics of charge transfer on electrodes

Physica ◽  
1972 ◽  
Vol 60 (2) ◽  
pp. 499-512 ◽  
Author(s):  
E. Bergmann
Keyword(s):  
Charge Transfer ◽  
New Approach ◽  
Kinetics Of

scholarly journals Simulation of Folding Kinetics for Aligned RNAs

Genes ◽  
2021 ◽  
Vol 12 (3) ◽  
pp. 347
Author(s):  
Jiabin Huang ◽  
Björn Voß
Keyword(s):  
Evolutionary Conservation ◽  
Folding Kinetics ◽  
New Approach ◽  
Computational Approaches ◽  
Reasonable Time ◽  
Valuable Method ◽  
Kinetics Of ◽  
Insight Into ◽  
Folding Space ◽  
Standing Problem

Studying the folding kinetics of an RNA can provide insight into its function and is thus a valuable method for RNA analyses. Computational approaches to the simulation of folding kinetics suffer from the exponentially large folding space that needs to be evaluated. Here, we present a new approach that combines structure abstraction with evolutionary conservation to restrict the analysis to common parts of folding spaces of related RNAs. The resulting algorithm can recapitulate the folding kinetics known for single RNAs and is able to analyse even long RNAs in reasonable time. Our program RNAliHiKinetics is the first algorithm for the simulation of consensus folding kinetics and addresses a long-standing problem in a new and unique way.

Long-range electron–electron interaction and charge transfer in protein complexes: a numerical approach

2019 ◽  
Vol 21 (34) ◽  
pp. 18595-18604 ◽  
Author(s):  
David Gnandt ◽  
Thorsten Koslowski
Keyword(s):  
Electron Transfer ◽  
Charge Transfer ◽  
Protein Complexes ◽  
Numerical Approach ◽  
Pair Approximation ◽  
Electron Interaction ◽  
Coulomb Interactions ◽  
Electron Transfer Proteins ◽  
Thermodynamics And Kinetics ◽  
Kinetics Of

Coulomb interactions in large electron transfer proteins can be addressed within a pair approximation. They have a profound effect on the thermodynamics and kinetics of charge transport.

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