Appendix 2 Flow cytometry data included in first found cluster analysis

1994 ◽  
Vol 43 (1-3) ◽  
pp. 317-333
2009 ◽  
Vol 2009 ◽  
pp. 1-2
Author(s):  
Raphael Gottardo ◽  
Ryan R. Brinkman ◽  
George Luta ◽  
Matt P. Wand

2008 ◽  
Vol 73A (4) ◽  
pp. 321-332 ◽  
Author(s):  
Kenneth Lo ◽  
Ryan Remy Brinkman ◽  
Raphael Gottardo

Genome ◽  
2008 ◽  
Vol 51 (10) ◽  
pp. 816-826 ◽  
Author(s):  
Séverine Bory ◽  
Olivier Catrice ◽  
Spencer Brown ◽  
Ilia J. Leitch ◽  
Rodolphe Gigant ◽  
...  

Vanilla planifolia accessions cultivated in Reunion Island display important phenotypic variation, but little genetic diversity is demonstrated by AFLP and SSR markers. This study, based on analyses of flow cytometry data, Feulgen microdensitometry data, chromosome counts, and stomatal length measurements, was performed to determine whether polyploidy could be responsible for some of the intraspecific phenotypic variation observed. Vanilla planifolia exhibited an important variation in somatic chromosome number in root cells, as well as endoreplication as revealed by flow cytometry. Nevertheless, the 2C-values of the 50 accessions studied segregated into three distinct groups averaging 5.03 pg (for most accessions), 7.67 pg (for the ‘Stérile’ phenotypes), and 10.00 pg (for the ‘Grosse Vanille’ phenotypes). For the three groups, chromosome numbers varied from 16 to 32, 16 to 38, and 22 to 54 chromosomes per cell, respectively. The stomatal length showed a significant variation from 37.75 µm to 48.25 µm. Given that 2C-values, mean chromosome numbers, and stomatal lengths were positively correlated and that ‘Stérile’ and ‘Grosse Vanille’ accessions were indistinguishable from ‘Classique’ accessions using molecular markers, the occurrence of recent autotriploid and autotetraploid types in Reunion Island is supported. This is the first report showing evidence of a recent autopolyploidy in V. planifolia contributing to the phenotypic variation observed in this species.


2017 ◽  
Vol 71 (2) ◽  
pp. 174-179 ◽  
Author(s):  
Gregory David Scott ◽  
Susan K Atwater ◽  
Dita A Gratzinger

AimsTo create clinically relevant normative flow cytometry data for understudied benign lymph nodes and characterise outliers.MethodsClinical, histological and flow cytometry data were collected and distributions summarised for 380 benign lymph node excisional biopsies. Outliers for kappa:lambda light chain ratio, CD10:CD19 coexpression, CD5:CD19 coexpression, CD4:CD8 ratios and CD7 loss were summarised for histological pattern, concomitant diseases and follow-up course.ResultsWe generated the largest data set of benign lymph node immunophenotypes by an order of magnitude. B and T cell antigen outliers often had background immunosuppression or inflammatory disease but did not subsequently develop lymphoma.ConclusionsDiagnostic immunophenotyping data from benign lymph nodes provide normative ranges for clinical use. Outliers raising suspicion for B or T cell lymphoma are not infrequent (26% of benign lymph nodes). Caution is indicated when interpreting outliers in the absence of excisional biopsy or clinical history, particularly in patients with concomitant immunosuppression or inflammatory disease.


2018 ◽  
Vol 145 ◽  
pp. 73-82 ◽  
Author(s):  
Ruben Props ◽  
Peter Rubbens ◽  
Michael Besmer ◽  
Benjamin Buysschaert ◽  
Jurg Sigrist ◽  
...  

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