Histone H4 acetylation dynamics determined by stable isotope labeling with amino acids in cell culture and mass spectrometry

Xiaodan Su; Liwen Zhang; David M. Lucas; Melanie E. Davis; Amy R. Knapp; Kari B. Green-Church; Guido Marcucci; Mark R. Parthun; John C. Byrd; Michael A. Freitas

doi:10.1016/j.ab.2006.12.031

Histone H4 acetylation dynamics determined by stable isotope labeling with amino acids in cell culture and mass spectrometry

Analytical Biochemistry ◽

10.1016/j.ab.2006.12.031 ◽

2007 ◽

Vol 363 (1) ◽

pp. 22-34 ◽

Cited By ~ 10

Author(s):

Xiaodan Su ◽

Liwen Zhang ◽

David M. Lucas ◽

Melanie E. Davis ◽

Amy R. Knapp ◽

...

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Isotope Labeling ◽

Stable Isotope Labeling ◽

Histone H4 ◽

Histone H4 Acetylation

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Stable Isotope Labeling with Amino Acids in Cell Culture Based Mass Spectrometry Approach to Detect Transient Protein Interactions Using Substrate Trapping

Analytical Chemistry ◽

10.1021/ac200950k ◽

2011 ◽

Vol 83 (14) ◽

pp. 5511-5518 ◽

Cited By ~ 8

Author(s):

Stefani N. Thomas ◽

Yunhu Wan ◽

Zhongping Liao ◽

Phyllis I. Hanson ◽

Austin J. Yang

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Protein Interactions ◽

Isotope Labeling ◽

Stable Isotope Labeling

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Binding of β4γ5by Adenosine A1and A2AReceptors Determined by Stable Isotope Labeling with Amino Acids in Cell Culture and Mass Spectrometry

Biochemistry ◽

10.1021/bi101227y ◽

2011 ◽

Vol 50 (2) ◽

pp. 207-220 ◽

Cited By ~ 2

Author(s):

Dora Bigler Wang ◽

Nicholas E. Sherman ◽

John D. Shannon ◽

Susan A. Leonhardt ◽

Linnia H. Mayeenuddin ◽

...

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Isotope Labeling ◽

Stable Isotope Labeling

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Discovery of Histone Modification Crosstalk Networks by Stable Isotope Labeling of Amino Acids in Cell Culture Mass Spectrometry (SILAC MS)

Molecular & Cellular Proteomics ◽

10.1074/mcp.m112.026716 ◽

2013 ◽

Vol 12 (8) ◽

pp. 2048-2059 ◽

Cited By ~ 27

Author(s):

Xiaoyan Guan ◽

Neha Rastogi ◽

Mark R. Parthun ◽

Michael A. Freitas

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Histone Modification ◽

Isotope Labeling ◽

Stable Isotope Labeling

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Using affinity purification coupled with stable isotope labeling by amino acids in cell culture quantitative mass spectrometry to identify novel interactors/substrates of protein arginine methyltransferases

Methods ◽

10.1016/j.ymeth.2019.11.015 ◽

2020 ◽

Vol 175 ◽

pp. 44-52 ◽

Cited By ~ 1

Author(s):

Alan Morettin ◽

Julie Bourassa ◽

Kohila Mahadevan ◽

Laura Trinkle-Mulcahy ◽

Jocelyn Cote

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Isotope Labeling ◽

Affinity Purification ◽

Stable Isotope Labeling ◽

Quantitative Mass Spectrometry ◽

Protein Arginine Methyltransferases

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IsoQuant: A Software Tool for Stable Isotope Labeling by Amino Acids in Cell Culture-Based Mass Spectrometry Quantitation

Analytical Chemistry ◽

10.1021/ac300510t ◽

2012 ◽

Vol 84 (10) ◽

pp. 4535-4543 ◽

Cited By ~ 18

Author(s):

Zhongping Liao ◽

Yunhu Wan ◽

Stefani N. Thomas ◽

Austin J. Yang

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Isotope Labeling ◽

Software Tool ◽

Stable Isotope Labeling

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Specific association of β 4 γ 5 to adenosine A 1 and A 2A receptors determined by stable isotope labeling with heavy amino acids in cell culture and mass spectrometry

The FASEB Journal ◽

10.1096/fasebj.25.1_supplement.1011.1 ◽

2011 ◽

Vol 25 (S1) ◽

Author(s):

William E McIntire ◽

Dora Bigler Wang ◽

Nicholas Sherman ◽

John Shannon ◽

Susan Leonhardt ◽

...

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Isotope Labeling ◽

Stable Isotope Labeling ◽

Specific Association

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Analysis of the Global Changes in SH2 Binding Properties Using Mass Spectrometry Supported by Quantitative Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) Technique

Methods in Molecular Biology - SH2 Domains ◽

10.1007/978-1-4939-6762-9_24 ◽

2017 ◽

pp. 419-428

Author(s):

Radoslaw M. Sobota

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Isotope Labeling ◽

Stable Isotope Labeling ◽

Global Changes ◽

Binding Properties

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Whole Proteome Analysis of the Protozoan Parasite Trypanosoma brucei Using Stable Isotope Labeling by Amino Acids in Cell Culture and Mass Spectrometry

Methods in Molecular Biology - Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) ◽

10.1007/978-1-4939-1142-4_4 ◽

2014 ◽

pp. 47-55 ◽

Cited By ~ 6

Author(s):

Olivera Cirovic ◽

Torsten Ochsenreiter

Keyword(s):

Mass Spectrometry ◽

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Trypanosoma Brucei ◽

Isotope Labeling ◽

Proteome Analysis ◽

Protozoan Parasite ◽

Stable Isotope Labeling

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Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) Applied to Quantitative Proteomics of Vibrio parahaemolyticus under Cold Stress

Current Proteomics ◽

10.2174/1570164615666180427110023 ◽

2018 ◽

Vol 15 (4) ◽

pp. 281-290 ◽

Cited By ~ 1

Author(s):

Weixing Ma ◽

Juntao Jia ◽

Ying Chen ◽

Junhong Liu

Keyword(s):

Amino Acids ◽

Cell Culture ◽

Stable Isotope ◽

Cold Stress ◽

Vibrio Parahaemolyticus ◽

Quantitative Proteomics ◽

Isotope Labeling ◽

Stable Isotope Labeling

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Quantitative, Time-Resolved Proteomic Analysis by Combining Bioorthogonal Noncanonical Amino Acid Tagging and Pulsed Stable Isotope Labeling by Amino Acids in Cell Culture

Molecular & Cellular Proteomics ◽

10.1074/mcp.m113.031914 ◽

2014 ◽

Vol 13 (5) ◽

pp. 1352-1358 ◽

Cited By ~ 44

Author(s):

John D. Bagert ◽

Yushu J. Xie ◽

Michael J. Sweredoski ◽

Yutao Qi ◽

Sonja Hess ◽

...

Keyword(s):

Amino Acids ◽

Cell Culture ◽

Amino Acid ◽

Stable Isotope ◽

Proteomic Analysis ◽

Isotope Labeling ◽

Stable Isotope Labeling ◽

Time Resolved ◽

Noncanonical Amino Acid

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