A modified two-stage Markov clustering algorithm for large and sparse networks

2016 ◽  
Vol 135 ◽  
pp. 15-26 ◽  
Author(s):  
László Szilágyi ◽  
Sándor M. Szilágyi
2004 ◽  
Vol 16 (6) ◽  
pp. 1193-1234 ◽  
Author(s):  
Yuanqing Li ◽  
Andrzej Cichocki ◽  
Shun-ichi Amari

In this letter, we analyze a two-stage cluster-then-l1-optimization approach for sparse representation of a data matrix, which is also a promising approach for blind source separation (BSS) in which fewer sensors than sources are present. First, sparse representation (factorization) of a data matrix is discussed. For a given overcomplete basis matrix, the corresponding sparse solution (coefficient matrix) with minimum l1 norm is unique with probability one, which can be obtained using a standard linear programming algorithm. The equivalence of the l1—norm solution and the l0—norm solution is also analyzed according to a probabilistic framework. If the obtained l1—norm solution is sufficiently sparse, then it is equal to the l0—norm solution with a high probability. Furthermore, the l1—norm solution is robust to noise, but the l0—norm solution is not, showing that the l1—norm is a good sparsity measure. These results can be used as a recoverability analysis of BSS, as discussed. The basis matrix in this article is estimated using a clustering algorithm followed by normalization, in which the matrix columns are the cluster centers of normalized data column vectors. Zibulevsky, Pearlmutter, Boll, and Kisilev (2000) used this kind of two-stage approach in underdetermined BSS. Our recoverability analysis shows that this approach can deal with the situation in which the sources are overlapped to some degree in the analyzed


2015 ◽  
Vol 16 (1) ◽  
Author(s):  
Theodore R. Gibbons ◽  
Stephen M. Mount ◽  
Endymion D. Cooper ◽  
Charles F. Delwiche

2017 ◽  
Vol 23 (5) ◽  
pp. 4258-4262
Author(s):  
Chia-Ling Chang ◽  
Yen-Liang Chen ◽  
Ya-Chun Hsiao ◽  
Ya-Wen Chang Chien

2017 ◽  
Vol 19 (1) ◽  
pp. 544-556 ◽  
Author(s):  
Po-Jen Hsu ◽  
Kun-Lin Ho ◽  
Sheng-Hsien Lin ◽  
Jer-Lai Kuo

A two-stage algorithm based both on the similarity in shape and hydrogen bond network is developed to explore the potential energy surface of methanol clusters.


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