An increase in precipitation exacerbates negative effects of nitrogen deposition on soil cations and soil microbial communities in a temperate forest

2018 ◽  
Vol 235 ◽  
pp. 293-301 ◽  
Author(s):  
Leilei Shi ◽  
Hongzhi Zhang ◽  
Tao Liu ◽  
Peng Mao ◽  
Weixin Zhang ◽  
...  
2016 ◽  
Vol 82 (22) ◽  
pp. 6518-6530 ◽  
Author(s):  
Grace Pold ◽  
Andrew F. Billings ◽  
Jeff L. Blanchard ◽  
Daniel B. Burkhardt ◽  
Serita D. Frey ◽  
...  

ABSTRACTAs Earth's climate warms, soil carbon pools and the microbial communities that process them may change, altering the way in which carbon is recycled in soil. In this study, we used a combination of metagenomics and bacterial cultivation to evaluate the hypothesis that experimentally raising soil temperatures by 5°C for 5, 8, or 20 years increased the potential for temperate forest soil microbial communities to degrade carbohydrates. Warming decreased the proportion of carbohydrate-degrading genes in the organic horizon derived from eukaryotes and increased the fraction of genes in the mineral soil associated withActinobacteriain all studies. Genes associated with carbohydrate degradation increased in the organic horizon after 5 years of warming but had decreased in the organic horizon after warming the soil continuously for 20 years. However, a greater proportion of the 295 bacteria from 6 phyla (10 classes, 14 orders, and 34 families) isolated from heated plots in the 20-year experiment were able to depolymerize cellulose and xylan than bacterial isolates from control soils. Together, these findings indicate that the enrichment of bacteria capable of degrading carbohydrates could be important for accelerated carbon cycling in a warmer world.IMPORTANCEThe massive carbon stocks currently held in soils have been built up over millennia, and while numerous lines of evidence indicate that climate change will accelerate the processing of this carbon, it is unclear whether the genetic repertoire of the microbes responsible for this elevated activity will also change. In this study, we showed that bacteria isolated from plots subject to 20 years of 5°C of warming were more likely to depolymerize the plant polymers xylan and cellulose, but that carbohydrate degradation capacity is not uniformly enriched by warming treatment in the metagenomes of soil microbial communities. This study illustrates the utility of combining culture-dependent and culture-independent surveys of microbial communities to improve our understanding of the role changing microbial communities may play in soil carbon cycling under climate change.


2017 ◽  
Vol 607-608 ◽  
pp. 1367-1375 ◽  
Author(s):  
Di Tian ◽  
Lai Jiang ◽  
Suhui Ma ◽  
Wenjing Fang ◽  
Bernhard Schmid ◽  
...  

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Changpeng Sang ◽  
Zongwei Xia ◽  
Lifei Sun ◽  
Hao Sun ◽  
Ping Jiang ◽  
...  

Abstract Background Freeze–thaw events are common in boreal and temperate forest ecosystems and are increasingly influenced by climate warming. Soil microorganisms play an important role in maintaining ecosystem stability, but their responses to freeze–thaw cycles (FTCs) are poorly understood. We conducted a field freeze–thaw experiment in a natural Korean pine and broadleaf mixed forest in the Changbai Mountain Nature Reserve, China, to determine the dynamic responses of soil microbial communities to FTCs. Results Bacteria were more sensitive than fungi to FTCs. Fungal biomass, diversity and community composition were not significantly affected by freeze–thaw regardless of the stage. Moderate initial freeze–thaw resulted in increased bacterial biomass, diversity, and copiotrophic taxa abundance. Subsequent FTCs reduced the bacterial biomass and diversity. Compared with the initial FTC, subsequent FTCs exerted an opposite effect on the direction of change in the composition and function of the bacterial community. Soil water content, dissolved organic carbon, ammonium nitrogen, and total dissolved phosphorus were important factors determining bacterial community diversity and composition during FTCs. Moreover, the functional potentials of the microbial community involved in C and N cycling were also affected by FTCs. Conclusions Different stages of FTCs have different ecological effects on the soil environment and microbial activities. Soil FTCs changed the soil nutrients and water availability and then mainly influenced bacterial community composition, diversity, and functional potentials, which may disturb C and N states in this temperate forest soil. This study also improves our understanding of microbial communities regulating their ecological functions in response to climate change.


2017 ◽  
Vol 83 (9) ◽  
Author(s):  
Jacynthe Masse ◽  
Cindy E. Prescott ◽  
Sébastien Renaut ◽  
Yves Terrat ◽  
Sue J. Grayston

ABSTRACT The Athabasca oil sand deposit is one of the largest single oil deposits in the world. Following surface mining, companies are required to restore soil-like profiles that can support the previous land capabilities. The objective of this study was to assess whether the soil prokaryotic alpha diversity (α-diversity) and β-diversity in oil sand soils reconstructed 20 to 30 years previously and planted to one of three vegetation types (coniferous or deciduous trees and grassland) were similar to those found in natural boreal forest soils subject to wildfire disturbance. Prokaryotic α-diversity and β-diversity were assessed using massively parallel sequencing of 16S rRNA genes. The β-diversity, but not the α-diversity, differed between reconstructed and natural soils. Bacteria associated with an oligotrophic lifestyle were more abundant in natural forest soils, whereas bacteria associated with a copiotrophic lifestyle were more abundant in reconstructed soils. Ammonia-oxidizing archaea were most abundant in reconstructed soils planted with grasses. Plant species were the main factor influencing α-diversity in natural and in reconstructed soils. Nitrogen deposition, pH, and plant species were the main factors influencing the β-diversity of the prokaryotic communities in natural and reconstructed soils. The results highlight the importance of nitrogen deposition and aboveground-belowground relationships in shaping soil microbial communities in natural and reconstructed soils. IMPORTANCE Covering over 800 km2, land disturbed by the exploitation of the oil sands in Canada has to be restored. Here, we take advantage of the proximity between these reconstructed ecosystems and the boreal forest surrounding the oil sand mining area to study soil microbial community structure and processes in both natural and nonnatural environments. By identifying key characteristics shaping the structure of soil microbial communities, this study improved our understanding of how vegetation, soil characteristics and microbial communities interact and drive soil functions.


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