scholarly journals Modeling current and future species distribution of breeding birds as regional essential biodiversity variables (SD EBVs): A bird perspective in Swiss Alps

2021 ◽  
Vol 27 ◽  
pp. e01596
Author(s):  
Nasrin Amini Tehrani ◽  
Babak Naimi ◽  
Michel Jaboyedoff
2013 ◽  
Vol 38 (1) ◽  
pp. 79-96 ◽  
Author(s):  
Jean-Nicolas Pradervand ◽  
Anne Dubuis ◽  
Loïc Pellissier ◽  
Antoine Guisan ◽  
Christophe Randin

Recent advances in remote sensing technologies have facilitated the generation of very high resolution (VHR) environmental data. Exploratory studies suggested that, if used in species distribution models (SDMs), these data should enable modelling species’ micro-habitats and allow improving predictions for fine-scale biodiversity management. In the present study, we tested the influence, in SDMs, of predictors derived from a VHR digital elevation model (DEM) by comparing the predictive power of models for 239 plant species and their assemblages fitted at six different resolutions in the Swiss Alps. We also tested whether changes of the model quality for a species is related to its functional and ecological characteristics. Refining the resolution only contributed to slight improvement of the models for more than half of the examined species, with the best results obtained at 5 m, but no significant improvement was observed, on average, across all species. Contrary to our expectations, we could not consistently correlate the changes in model performance with species characteristics such as vegetation height. Temperature, the most important variable in the SDMs across the different resolutions, did not contribute any substantial improvement. Our results suggest that improving resolution of topographic data only is not sufficient to improve SDM predictions – and therefore local management – compared to previously used resolutions (here 25 and 100 m). More effort should be dedicated now to conduct finer-scale in-situ environmental measurements (e.g. for temperature, moisture, snow) to obtain improved environmental measurements for fine-scale species mapping and management.


Author(s):  
Robin Boyd ◽  
Nick Isaac ◽  
Robert Cooke ◽  
Francesca Mancini ◽  
Tom August ◽  
...  

Species Distribution Essential Biodiversity Variables (SD EBVs; Pereira et al. 2013, Kissling et al. 2017, Jetz et al. 2019) are defined as measurements or estimates of species’ occupancy along the axes of space, time and taxonomy. In the “ideal” case, additional stipulations have been proposed: occupancy should be characterized contiguously along each axis at grain sizes relevant to policy and process (i.e., fine scale); and the SD EBV should be global in extent, or at least span the entirety of the focal taxa’s geographical range (Jetz et al. 2019). These stipulations set the bar very high and, unsurprisingly, most operational SD EBVs fall short of these ideal criteria. In this presentation, I will discuss the major challenges associated with developing the idealized SD EBV. I will demonstrate these challenges using an operational SD EBV spanning ~6000 species in the United Kingdom (UK) over the period 1970 to 2019 as a case study (Outhwaite et al. 2019). In short, this data product comprises annual estimates of occupancy for each species in all sampled 1 km cells across the UK; these are derived from opportunistically-collected species occurrence data using occupancy-detection models (Kéry et al. 2010). Having discussed which of the “ideal” criteria the case study satisfies, I will then touch on what are, in my view, two underappreciated challenges when constructing SD EBVs: dealing with sampling biases in the underlying data and the difficulty in evaluating the extent to which they bias the final product. These challenges should be addressed as a matter of urgency, as SD EBVs are increasingly applied in important settings such as underpinning national and international biodiversity indicators (see e.g., https://geobon.org/ebvs/indicators/).


2017 ◽  
Vol 93 (1) ◽  
pp. 600-625 ◽  
Author(s):  
W. Daniel Kissling ◽  
Jorge A. Ahumada ◽  
Anne Bowser ◽  
Miguel Fernandez ◽  
Néstor Fernández ◽  
...  

2017 ◽  
Vol 41 (6) ◽  
pp. 703-722 ◽  
Author(s):  
Aline Buri ◽  
Carmen Cianfrani ◽  
Eric Pinto-Figueroa ◽  
Erika Yashiro ◽  
Jorge E Spangenberg ◽  
...  

Explanatory studies suggest that using very high resolution (VHR, 1–5 m resolution) topo-climatic predictors may improve the predictive power of plant species distribution models (SDMs). However, the use of VHR topo-climatic data alone was recently shown not to significantly improve SDM predictions. This suggests that new ecologically-meaningful VHR variables based on more direct field measurements are needed, especially since non topo-climatic variables, such as soil parameters, are important for plants. In this study, we investigated the effects of adding mapped VHR predictors at a 5 m resolution, including field measurements of temperature, carbon isotope composition of soil organic matter (δ13CSOM values) and soil pH, to topo-climatic predictors in SDMs for the Swiss Alps. We used data from field temperature loggers to construct temperature maps, and we modelled the geographic variation in δ13CSOM and soil pH values. We then tested the effect of adding these VHR mapped variables as predictors into 154 plant SDMs and assessed the improvement in spatial predictions across the study area. Our results demonstrate that the use of VHR predictors based on more proximal field measurements, particularly soil parameters, can significantly increase the predictive power of models. Predicted soil pH was the second most important predictor after temperature, and predicted δ13CSOM was fourth. The greatest increase in model performance was for species found at high elevation (i.e. 1500–2000 m a.s.l.). Addition of predicted soil factors thus allowed better capturing of plant requirements in our models, showing that these can explain species distributions in ways complementary to topo-climatic variables. Modelling techniques to generalize edaphic information in space and then predict plant species distributions revealed a great potential in complex landscapes such as the mountain region considered in this study.


Author(s):  
Nick Isaac ◽  
Tom August ◽  
Charlie Outhwaite

A coherent framework for building Essential Biodiversity Variables (EBVs) is now emerging, but there are few examples of EBVs being produced at large extents. I describe the creation of a species distribution EBV for the United Kingdom, covering 5293 species from 1970-2015. The data product contains an annual occupancy estimate for every species in each year, each with a measure of uncertainty. I will describe the workflow to produce this data product. The data collation step bring togehter different sources of occurrence records; the data standardisation step harmonizes these records to a common spatio-temporal resolution. These data are then converted into a set of 'detection histories' for each species within each taxonomic group, before being passed to the occupancy-detection model. Outputs from this model are then summarised as 1000 samples from the postierior distribution of occupancy estimates for each species:year combination. I will also describe the infrastructure requirements to create the EBV and to update it annually. This endeavour has been made possible because the vast majority of the 34 million species records have been collated and curated by 31 taxon-oriented citizen science groups. I go on to describe the challenges of harmonizing and integrating these occurrence records with other data types, such as from systematic surveys, including count data. Such "integrated models" are statisitcally challenging, but now within reach, thanks to the development of new tools that make it possible to conceive of modelling everything, everywhere. However, a substantial and concerted effort is required to curate biodiversity data in a way that maximises their potential for the next generation of models, and for truly global EBVs.


Planta Medica ◽  
2016 ◽  
Vol 81 (S 01) ◽  
pp. S1-S381
Author(s):  
B Liu ◽  
F Li ◽  
Z Guo ◽  
L Hong ◽  
W Huang ◽  
...  

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