A crystallization technique for obtaining large protein crystals with increased mechanical stability using agarose gel combined with a stirring technique

2016 ◽  
Vol 452 ◽  
pp. 172-178 ◽  
Author(s):  
Mihoko Maruyama ◽  
Yuki Hayashi ◽  
Hiroshi Y. Yoshikawa ◽  
Shino Okada ◽  
Haruhiko Koizumi ◽  
...  
2009 ◽  
Vol 312 (1) ◽  
pp. 73-78 ◽  
Author(s):  
Hitoshi Hasenaka ◽  
Shigeru Sugiyama ◽  
Mika Hirose ◽  
Noriko Shimizu ◽  
Tomoya Kitatani ◽  
...  

2008 ◽  
Vol 64 (a1) ◽  
pp. C247-C248
Author(s):  
N. Shimizu ◽  
H. Yoshikawa ◽  
M. Adachi ◽  
T. Tamada ◽  
K. Hidaka ◽  
...  

2013 ◽  
Vol 69 (12) ◽  
pp. 2583-2583 ◽  
Author(s):  
Hui-Ling Cao ◽  
Li-Hua Sun ◽  
Jian Li ◽  
Lin Tang ◽  
Hui-Meng Lu ◽  
...  

Table 2 of the article by Caoet al.[(2013),Acta Cryst.D69, 1901–1910] is corrected.


Cells ◽  
2021 ◽  
Vol 10 (10) ◽  
pp. 2738
Author(s):  
Dimitra Kiritsi ◽  
Leonidas Tsakiris ◽  
Franziska Schauer

Plectin is a multi-faceted, 500 kDa-large protein, which due to its expression in different isoforms and distinct organs acts diversely as a cytoskeletal crosslinker and signaling scaffold. It functions as a mediator of keratinocyte mechanical stability in the skin, primarily through linking intermediate filaments to hemidesmosomes. Skin fragility may occur through the presence of mutations in the gene encoding for plectin, PLEC, or through the presence of autoantibodies against the molecule. Below, we review the cutaneous manifestations of plectinopathies as well as their systemic involvement in specific disease subtypes. We summarize the known roles of plectin in keratinocytes and fibroblasts and provide an outlook on future perspectives for plectin-associated skin disorders.


2010 ◽  
Vol 43 (4) ◽  
pp. 937-939 ◽  
Author(s):  
Keisuke Kakinouchi ◽  
Tsutomu Nakamura ◽  
Taro Tamada ◽  
Hiroaki Adachi ◽  
Shigeru Sugiyama ◽  
...  

A method for growing large protein crystals is described. In this method, a cut pipette tip is used to hang large-scale droplets (maximum volume 200 µl) consisting of protein and precipitating agents. A crystal grows at the vapor–liquid interface; thereafter the grown crystal can be retrieved by droplet–droplet contact both for repeated macroseeding and for mounting crystals in a capillary. Crystallization experiments with peroxiredoxin ofAeropyrum pernixK1 (thioredoxin peroxidase, ApTPx) and hen egg white lysozyme demonstrated that this large-scale hanging-drop method could produce a large-volume crystal very effectively. A neutron diffraction experiment confirmed that an ApTPx crystal (6.2 mm3) obtained by this method diffracted to beyond 3.5 Å resolution.


2001 ◽  
Vol 34 (3) ◽  
pp. 388-391 ◽  
Author(s):  
Genpei Li ◽  
Ye Xiang ◽  
Ying Zhang ◽  
Da-Cheng Wang

The rate of water vaporization in the vapor-diffusion method is critical for the protein crystallization process. Present methods, however, allow little or no control of the equilibration rates. This paper presents a relatively simple innovation of the conventional vapor-diffusion method by introducing a capillary barrier (for hanging drop) or a punched film barrier (for both hanging and sitting drop) between drop and reservoir, which can be beneficial in controlling the water vaporization rate, thereby promoting growth of large protein crystals. The crystallization experiments for lysozyme, trichosanthin and a novel neurotoxin BmK Mu9 show that this modified vapor-controlling-diffusion method is very effective for producing large protein crystals. The improved technique can be routinely used as a method for the preparation of other macromolecular and small-molecule crystals whose crystallization involves vaporization of water.


1994 ◽  
Vol 91 (18) ◽  
pp. 8715-8718 ◽  
Author(s):  
D. M. York ◽  
A. Wlodawer ◽  
L. G. Pedersen ◽  
T. A. Darden

2013 ◽  
Vol 69 (10) ◽  
pp. 1901-1910 ◽  
Author(s):  
Hui-Ling Cao ◽  
Li-Hua Sun ◽  
Jian Li ◽  
Lin Tang ◽  
Hui-Meng Lu ◽  
...  

High-quality crystals are key to obtaining accurate three-dimensional structures of proteins using X-ray diffraction techniques. However, obtaining such protein crystals is often a challenge. Several containerless crystallization techniques have been reported to have the ability to improve crystal quality, but it is unknown which is the most favourable way to grow high-quality protein crystals. In this paper, a quality comparison of protein crystals which were grown under three containerless conditions provided by diamagnetic levitation, silicone oil and agarose gel was conducted. A control experiment on a vessel wall was also simultaneously carried out. Seven different proteins were crystallized under the four conditions, and the crystal quality was assessed in terms of the resolution limit, the mosaicity and theRmerge. It was found that the crystals grown under the three containerless conditions demonstrated better morphology than those of the control. X-ray diffraction data indicated that the quality of the crystals grown under the three containerless conditions was better than that of the control. Of the three containerless crystallization techniques, the diamagnetic levitation technique exhibited the best performance in enhancing crystal quality. This paper is to our knowledge the first report of improvement of crystal quality using a diamagnetic levitation technique. Crystals obtained from agarose gel demonstrated the second best improvement in crystal quality. The study indicated that the diamagnetic levitation technique is indeed a favourable method for growing high-quality protein crystals, and its utilization is thus potentially useful in practical efforts to obtain well diffracting protein crystals.


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