scholarly journals Temperature robustness in Arabidopsis circadian clock models is facilitated by repressive interactions, autoregulation, and three-node feedbacks

2021 ◽  
Vol 509 ◽  
pp. 110495
Author(s):  
Paula Avello ◽  
Seth J. Davis ◽  
Jonathan W. Pitchford
Keyword(s):  
Circadian Clock ◽  
Clock Models

scholarly journals Cell Type-Specific Functions of Period Genes Revealed by Novel Adipocyte and Hepatocyte Circadian Clock Models

PLoS Genetics ◽  
2014 ◽  
Vol 10 (4) ◽  
pp. e1004244 ◽  
Author(s):  
Chidambaram Ramanathan ◽  
Haiyan Xu ◽  
Sanjoy K. Khan ◽  
Yang Shen ◽  
Paula J. Gitis ◽  
...  
Keyword(s):  
Circadian Clock ◽  
Cell Type ◽  
Cell Type Specific ◽  
Clock Models

Saturation of Enzyme Kinetics in Circadian Clock Models

2002 ◽  
Vol 17 (6) ◽  
pp. 568-577 ◽  
Author(s):  
Gen Kurosawa ◽  
Yoh Iwasa
Keyword(s):  
Circadian Clock ◽  
Enzyme Kinetics ◽  
Clock Models

Temperature compensation in circadian clock models

2005 ◽  
Vol 233 (4) ◽  
pp. 453-468 ◽  
Author(s):  
Gen Kurosawa ◽  
Yoh Iwasa
Keyword(s):  
Circadian Clock ◽  
Temperature Compensation ◽  
Clock Models

scholarly journals Integrating Oscillator-Based Circadian Clocks with Crop Growth Simulations

2021 ◽  
Author(s):  
Edward B Lochocki ◽  
Justin M McGrath
Keyword(s):  
Circadian Clock ◽  
Growth Models ◽  
Crop Growth ◽  
Controlled Environment ◽  
High Fidelity ◽  
Clock Model ◽  
Development Models ◽  
Growth Development ◽  
Crop Growth Models ◽  
Clock Models

Abstract Circadian rhythms play critical roles in plant physiology, growth, development, and survival, and their inclusion in crop growth models is essential for high fidelity results, especially when considering climate change. Commonly used circadian clock models are often inflexible or result in complex outputs, limiting their use in general simulations. Here we present a new circadian clock model based on mathematical oscillators that easily adapts to different environmental conditions and produces intuitive outputs. We then demonstrate its utility as an input to Glycine max development models. This oscillator clock model has the power to simplify the inclusion of circadian cycles and photoperiodic effects in crop growth models and to unify experimental data from field and controlled environment observations.

scholarly journals Saturation of Enzyme Kinetics in Circadian Clock Models

2003 ◽  
Vol 43 (supplement) ◽  
pp. S220
Author(s):  
G. Kurosawa ◽  
Y. Iwasa
Keyword(s):  
Circadian Clock ◽  
Enzyme Kinetics ◽  
Clock Models

Comparative Study of Circadian Clock Models, in Search of Processes Promoting Oscillation

2002 ◽  
Vol 216 (2) ◽  
pp. 193-208 ◽  
Author(s):  
GEN KUROSAWA ◽  
ATSUSHI MOCHIZUKI ◽  
YOH IWASA
Keyword(s):  
Comparative Study ◽  
Circadian Clock ◽  
Clock Models

scholarly journals The Contributions of Interlocking Loops and Extensive Nonlinearity to the Properties of Circadian Clock Models

PLoS ONE ◽  
2010 ◽  
Vol 5 (11) ◽  
pp. e13867 ◽  
Author(s):  
Treenut Saithong ◽  
Kevin J. Painter ◽  
Andrew J. Millar
Keyword(s):  
Circadian Clock ◽  
Clock Models
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