scholarly journals Screening neutral sites for metabolic engineering of methylotrophic yeast Ogataea polymorpha

2021 ◽  
Vol 6 (2) ◽  
pp. 63-68
Author(s):  
Wei Yu ◽  
Jiaoqi Gao ◽  
Xiaoxin Zhai ◽  
Yongjin J. Zhou
Author(s):  
Olena G. Stasyk ◽  
Iryna O. Denega ◽  
Dzmitry Padhorny ◽  
Kostyantyn V. Dmytruk ◽  
Dima Kozakov ◽  
...  

2021 ◽  
Author(s):  
Shen Jiangyan ◽  
Kaoru Takegawa ◽  
Gislene Pereira ◽  
Hiromi Maekawa

The Mitotic exit network (MEN) is a conserved signalling pathway essential for termination of mitosis in the budding yeast Saccharomyces cerevisiae. All MEN components are highly conserved in the methylotrophic budding yeast Ogataea polymorpha, except for Cdc15 kinase. Amongst O. polymorpha protein kinases that have some similarity to ScCdc15, only two had no other obvious homologues in S. cerevisiae and these were named OpHCD1 and OpHCD2 for homologue candidate of ScCdc15. A search in other yeast species revealed that OpHcd2 has an armadillo type fold in the C-terminal region as found in SpCdc7 kinases of the fission yeast Schizosaccharomyces pombe, which are homologues of ScCdc15; while OpHcd1 is homologous to SpSid1 kinase, a component of the Septation Initiation Network (SIN) of S. pombe not present in the MEN. Since the deletion of either OpHCD1 or OpHCD2 resulted in lethality under standard growth conditions, conditional mutants were constructed by introducing an ATP analog sensitive mutation. For OpHCD2, we constructed and used new genetic tools for O. polymorpha that combined the Tet promoter and the improved auxin-degron systems. Conditional mutants for OpHCD1 and OpHCD2 exhibited significant delay in late anaphase and defective cell separation, suggesting that both genes have roles in mitotic exit and cytokinesis. These results suggest a SIN-like signalling pathway regulates termination of mitosis in O. polymorpha and that the loss of Sid1/Hcd1 kinase in the MEN occurred relatively recently during the evolution of budding yeast.


2019 ◽  
Vol 35 (6) ◽  
pp. 51-56
Author(s):  
M.D. Kashirskaya ◽  
M.N. Lazareva ◽  
A.R. Lapteva ◽  
V.Yu. Dobrynin ◽  
T.L. Gordeeva ◽  
...  

The genes for bacterial phytases from Citrobacter freundii and Yersinia intermedia were expressed for the first time in a thermotolarant yeast Ogataea polymorpha. A comparative analysis of the properties of recombinant phytases produced by Ogataea polymorpha and Pichia pastoris yeasts was carried out. It was shown that the stability, pH and temperature profiles of the enzyme activities are the same regardless of the host strain. It was proved that O. polymorpha yeast can be used to create producers of feed enzymes and to develop a technology for their cultivation at temperatures above 37 °C. The prospects of using the O. polymorpha yeast for these purposes were evaluated. Ogataea (Hansenula) polymorpha, Pichia pastoris, methylotrophic yeast, thermal tolerance, producer, recombinant phytase The work was financially supported by the Ministry of Science and Higher Education of RF (Project Unique Identifier RFMEFI57917X0145) using the Multipurpose Scientific Installation of All-Russian National Collection of Industrial Microorganisms National Bioresource Center, NRC «Kurchatov Institute»-GosNIIgenetika.


iScience ◽  
2021 ◽  
Vol 24 (3) ◽  
pp. 102168 ◽  
Author(s):  
Jiaoqi Gao ◽  
Ning Gao ◽  
Xiaoxin Zhai ◽  
Yongjin J. Zhou

2019 ◽  
Author(s):  
Thomas Gassler ◽  
Michael Sauer ◽  
Brigitte Gasser ◽  
Diethard Mattanovich ◽  
Matthias G. Steiger

AbstractThe methylotrophic yeast Pichia pastoris is frequently used for heterologous protein production and it assimilates methanol efficiently via the xylulose-5-phosphate pathway. This pathway is entirely localized in the peroxisomes and has striking similarities to the Calvin-Benson-Bassham (CBB) cycle, which is used by a plethora of organisms like plants to assimilate CO2 and is likewise compartmentalized in chloroplasts. By metabolic engineering the methanol assimilation pathway of P. pastoris was re-wired to a CO2 fixation pathway resembling the CBB cycle. This new yeast strain efficiently assimilates CO2 into biomass and utilizes it as its sole carbon source, which changes the lifestyle from heterotrophic to autotrophic.In total eight genes, including genes encoding for RuBisCO and phosphoribulokinase, were integrated into the genome of P. pastoris, while three endogenous genes were deleted to block methanol assimilation. The enzymes necessary for the synthetic CBB cycle were targeted to the peroxisome. Methanol oxidation, which yields NADH, is employed for energy generation defining the lifestyle as chemoorganoautotrophic. This work demonstrates that the lifestyle of an organism can be changed from chemoorganoheterotrophic to chemoorganoautotrophic by metabolic engineering. The resulting strain can grow exponentially and perform multiple cell doublings on CO2 as sole carbon source with a µmax of 0.008 h−1.Graphical Abstract


2020 ◽  
Vol 14 (3) ◽  
pp. 13-28
Author(s):  
N. V. Grushanyk ◽  
◽  
I. A. Sarai ◽  
O. V. Stasyk ◽  
O. G. Stasyk ◽  
...  

2018 ◽  
Vol 18 (2) ◽  
Author(s):  
Kostyantyn V Dmytruk ◽  
Justyna Ruchala ◽  
Dorota Grabek-Lejko ◽  
Czeslaw Puchalski ◽  
Nina V Bulbotka ◽  
...  

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