scholarly journals Analyzing conformational dynamics of single P-glycoprotein transporters by Förster resonance energy transfer using hidden Markov models

Methods ◽  
2014 ◽  
Vol 66 (2) ◽  
pp. 168-179 ◽  
Author(s):  
Nawid Zarrabi ◽  
Stefan Ernst ◽  
Brandy Verhalen ◽  
Stephan Wilkens ◽  
Michael Börsch
Keyword(s):  
Energy Transfer ◽  
Hidden Markov Models ◽  
Markov Models ◽  
Hidden Markov ◽  
Conformational Dynamics ◽  
Resonance Energy Transfer ◽  
Resonance Energy ◽  
Förster Resonance Energy Transfer ◽  
P Glycoprotein ◽  
Förster Resonance

Monitoring the Structural Dynamics of U2 snRNA Via Single-Molecule Förster Resonance Energy Transfer

2018 ◽  
Author(s):  
Alexander Carl DeHaven
Keyword(s):  
Energy Transfer ◽  
Structural Dynamics ◽  
Single Molecule ◽  
Conformational Dynamics ◽  
Resonance Energy Transfer ◽  
Resonance Energy ◽  
Förster Resonance Energy Transfer ◽  
U2 Snrna ◽  
Folding Dynamics ◽  
The Impact

This thesis contains four topic areas: a review of single-molecule microscropy methods and splicing, conformational dynamics of stem II of the U2 snRNA, the impact of post-transcriptional modifications on U2 snRNA folding dynamics, and preliminary findings on Mango aptamer folding dynamics.

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