scholarly journals A damage-specific DNA binding protein. Large scale purification from human placenta and characterization.

1982 ◽  
Vol 257 (11) ◽  
pp. 6394-6401
Author(s):  
R S Feldberg ◽  
J L Lucas ◽  
A Dannenberg
Keyword(s):  
Dna Binding ◽  
Human Placenta ◽  
Large Scale ◽  
Binding Protein ◽  
Dna Binding Protein

scholarly journals KK-DBP: A Multi-Feature Fusion Method for DNA-Binding Protein Identification Based on Random Forest

2021 ◽  
Vol 12 ◽  
Author(s):  
Yuran Jia ◽  
Shan Huang ◽  
Tianjiao Zhang
Keyword(s):  
Dna Binding ◽  
Prediction Accuracy ◽  
Large Scale ◽  
Protein Identification ◽  
Feature Fusion ◽  
Binding Protein ◽  
Rapid Development ◽  
Dna Binding Protein ◽  
Feature Extraction Method ◽  
Independent Test Dataset

DNA-binding protein (DBP) is a protein with a special DNA binding domain that is associated with many important molecular biological mechanisms. Rapid development of computational methods has made it possible to predict DBP on a large scale; however, existing methods do not fully integrate DBP-related features, resulting in rough prediction results. In this article, we develop a DNA-binding protein identification method called KK-DBP. To improve prediction accuracy, we propose a feature extraction method that fuses multiple PSSM features. The experimental results show a prediction accuracy on the independent test dataset PDB186 of 81.22%, which is the highest of all existing methods.

scholarly journals Effect of site-specific DNA methylation and mutagenesis on recognition by methylated DNA-binding protein from human placenta

1986 ◽  
Vol 14 (21) ◽  
pp. 8387-8397 ◽  
Author(s):  
Xian-Yang Zhang ◽  
Kenneth C. Ehrlich ◽  
Richard Y.-H. Wang ◽  
Melanie Ehrlich
Keyword(s):  
Dna Methylation ◽  
Dna Binding ◽  
Human Placenta ◽  
Binding Protein ◽  
Dna Binding Protein ◽  
Site Specific ◽  
Methylated Dna

scholarly journals Methylated DNA-binding protein from human placenta recognizes specific methylated sites on several prokaryotic DNAs

1986 ◽  
Vol 14 (24) ◽  
pp. 9843-9860 ◽  
Author(s):  
Richard Y.H. Wang ◽  
Xian-Yang Zhang ◽  
Rana Khan ◽  
Youwen Zhou ◽  
Lan-Hsiang Huang ◽  
...  
Keyword(s):  
Dna Binding ◽  
Human Placenta ◽  
Binding Protein ◽  
Dna Binding Protein ◽  
Methylated Dna

scholarly journals Mitochondrial single-stranded DNA binding protein novel de novo SSBP1 mutation in a child with single large-scale mtDNA deletion (SLSMD) clinically manifesting as Pearson, Kearns-Sayre, and Leigh syndromes

PLoS ONE ◽  
2019 ◽  
Vol 14 (9) ◽  
pp. e0221829 ◽  
Author(s):  
Margaret A. Gustafson ◽  
Elizabeth M. McCormick ◽  
Lalith Perera ◽  
Matthew J. Longley ◽  
Renkui Bai ◽  
...  
Keyword(s):  
Dna Binding ◽  
Large Scale ◽  
De Novo ◽  
Binding Protein ◽  
Dna Binding Protein ◽  
Single Stranded Dna ◽  
Mtdna Deletion

scholarly journals Related sites in human and herpesvirus DNA recognized by methylated DNA-binding protein from human placenta

1989 ◽  
Vol 17 (4) ◽  
pp. 1459-1474 ◽  
Author(s):  
Xian-Yang Zhang ◽  
Prakash C. Supakar ◽  
Rana Khan ◽  
Kenneth C. Ehrlich ◽  
Melanie Ehrlich
Keyword(s):  
Dna Binding ◽  
Human Placenta ◽  
Binding Protein ◽  
Dna Binding Protein ◽  
Methylated Dna

A DNA binding protein from human placenta specific for ultraviolet damaged DNA

Biochemistry ◽  
1976 ◽  
Vol 15 (11) ◽  
pp. 2402-2408 ◽  
Author(s):  
Ross S. Feldberg ◽  
Lawrence Grossman
Keyword(s):  
Dna Binding ◽  
Human Placenta ◽  
Binding Protein ◽  
Dna Binding Protein ◽  
Damaged Dna

The DNA-binding protein YB-1 is a direct MYCN target and influences repair and resistance in neuroblastoma cell lines

2010 ◽  
Vol 222 (03) ◽  
Author(s):  
S Degen ◽  
S Kuhfittig-Kulle ◽  
JH Schulte ◽  
F Westermann ◽  
A Schramm ◽  
...  
Keyword(s):  
Dna Binding ◽  
Cell Lines ◽  
Binding Protein ◽  
Neuroblastoma Cell ◽  
Dna Binding Protein ◽  
Neuroblastoma Cell Lines
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