The human MJD gene: genomic structure and functional characterization of the promoter region

Gene ◽  
2003 ◽  
Vol 314 ◽  
pp. 81-88 ◽  
Author(s):  
Ina Schmitt ◽  
Bernd O. Evert ◽  
Hassan Khazneh ◽  
Thomas Klockgether ◽  
Ullrich Wuellner
PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11508
Author(s):  
Yubing Yong ◽  
Yue Zhang ◽  
Yingmin Lyu

Background. We have previously performed an analysis of the cold-responsive transcriptome in the mature leaves of tiger lily (Lilium lancifolium) by gene co-expression network identification. The results has revealed that a ZFHD gene, notated as encoding zinc finger homeodomain protein, may play an essential regulating role in tiger lily response to cold stress. Methods. A further investigation of the ZFHD gene (termed as LlZFHD4) responding to osmotic stresses, including cold, salt, water stresses, and abscisic acid (ABA) was performed in this study. Based on the transcriptome sequences, the coding region and 5′ promoter region of LlZFHD4 were cloned from mature tiger lily leaves. Stress response analysis was performed under continuous 4 °C, NaCl, PEG, and ABA treatments. Functional characterization of LlZFHD4 was conducted in transgenic Arabidopsis, tobacco, and yeast. Results. LlZFHD4 encodes a nuclear-localized protein consisting of 180 amino acids. The N-terminal region of LlZFHD4 has transcriptional activation activity in yeast. The 4 °C, NaCl, PEG, and ABA treatments induced the expression of LlZFHD4. Several stress- or hormone-responsive cis-acting regulatory elements (T-Box, BoxI. and ARF) and binding sites of transcription factors (MYC, DRE and W-box) were found in the core promoter region (789 bp) of LlZFHD4. Also, the GUS gene driven by LlZFHD4 promoter was up-regulated by cold, NaCl, water stresses, and ABA in Arabidopsis. Overexpression of LlZFHD4 improved cold and drought tolerance in transgenic Arabidopsis; higher survival rate and better osmotic adjustment capacity were observed in LlZFHD4 transgenic plants compared to wild type (WT) plants under 4 °C and PEG conditions. However, LlZFHD4 transgenic plants were less tolerant to salinity and more hypersensitive to ABA compared to WT plants. The transcript levels of stress- and ABA-responsive genes were much more up-regulated in LlZFHD4 transgenic Arabidopsis than WT. These results indicate LlZFHD4 is involved in ABA signaling pathway and plays a crucial role in regulating the response of tiger lily to cold, salt and water stresses.


2014 ◽  
Vol 99 (5) ◽  
pp. E931-E935 ◽  
Author(s):  
Karen Mei Ling Tan ◽  
Shu Qin Delicia Ooi ◽  
Siong Gim Ong ◽  
Charmaine Shuyi Kwan ◽  
Raymond Ming En Chan ◽  
...  

1987 ◽  
Vol 7 (7) ◽  
pp. 2592-2596
Author(s):  
E K Hoffman ◽  
S P Trusko ◽  
N Freeman ◽  
D L George

We isolated and characterized the 5' region of the mouse c-Ki-ras gene, including a 5' untranslated exon (exon 0). These studies used genetic material from Y1 mouse adrenocortical tumor cells in which the c-Ki-ras gene is amplified and overexpressed. Our data demonstrate that transcription initiates at multiple sites, predicting size heterogeneity at the 5' ends of the c-Ki-ras mRNAs. Using transient expression assays, we identified a genomic fragment within the 5' region which exhibits bidirectional promoter activity.


2000 ◽  
Vol 20 (5) ◽  
pp. 1335-1339 ◽  
Author(s):  
Ferdinand M. van ′t Hooft ◽  
Björn Lundahl ◽  
Francesca Ragogna ◽  
Fredrik Karpe ◽  
Gunilla Olivecrona ◽  
...  

2000 ◽  
Vol 279 (3) ◽  
pp. F482-F490 ◽  
Author(s):  
Ana M. Pajor ◽  
Nina N. Sun

The sodium-dicarboxylate cotransporter of the renal proximal tubule, NaDC-1, reabsorbs filtered Krebs cycle intermediates and plays an important role in the regulation of urinary citrate concentrations.1 Low urinary citrate is a risk factor for the development of kidney stones. As an initial step in the characterization of NaDC-1 regulation, the genomic structure and functional properties of the mouse Na+-dicarboxylate cotransporter (mNaDC-1) were determined. The gene coding for mNaDC-1, Slc13a2, is found on chromosome 11. The gene is ∼24.9 kb in length and contains 12 exons. The mRNA coding for mNaDC-1 is found in kidney and small intestine. Expression of mNaDC-1 in Xenopus laevis oocytes results in increased transport of di- and tricarboxylates. The Michaelis-Menten constant ( K m) for succinate was 0.35 mM, and the K m for citrate was 0.6 mM. The transport of citrate was stimulated by acidic pH, whereas the transport of succinate was insensitive to pH changes. Transport by mNaDC-1 is electrogenic, and substrates produced inward currents in the presence of sodium. The sodium affinity was relatively high in mNaDC-1, with half-saturation constants for sodium of 10 mM (radiotracer experiments) and 28 mM at −50 mV (2-electrode voltage clamp experiments). Lithium acts as a potent inhibitor of transport, but it can also partially substitute for sodium. In conclusion, the mNaDC-1 is related in sequence and function to the other NaDC-1 orthologs. However, its function more closely resembles the rabbit and human orthologs rather than the rat NaDC-1, with which it shares higher sequence similarity.


Hepatology ◽  
1997 ◽  
Vol 26 (4) ◽  
pp. 991-997 ◽  
Author(s):  
G Kullak-Ublick ◽  
U Beuers ◽  
C Fahney ◽  
B Hagenbuch ◽  
P J Meier ◽  
...  

2004 ◽  
Vol 67 (12) ◽  
pp. 2231-2238 ◽  
Author(s):  
Christelle Cauffiez ◽  
Florian Klinzig ◽  
Emmanuel Rat ◽  
Gilles Tournel ◽  
Delphine Allorge ◽  
...  

2001 ◽  
Vol 11 (7) ◽  
pp. 555-572 ◽  
Author(s):  
Jiong Zhang ◽  
Peter Kuehl ◽  
Eric D. Green ◽  
Jeffery W. Touchman ◽  
Paul B. Watkins ◽  
...  

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