Thin-section photomicrography

Author(s):  
Jack Holm ◽  
Rachel Goss

A fundamental problem in conventional light microscopy has long been the lack of image quality brought about by the use of sections which are thicker than the depth of field (DOF) of the microscope. These sections are used because “paraffin & steel” microtomy techniques preclude sections thinner than a few microns. The transmission electron microscope, however, requires section thicknesses of less than a micron. This requirement has resulted in the development of “epoxy & glass” microtomy techniques, and the ability to cut sections as thin as a few hundred Ångstroms. These thin sections are not routinely used for light microscopy because of the difficulty of preparation, the need for large section areas, and because of photomicrographic problems. The first two reasons may inhibit the use of thin sections in some situations, but the photomicrographic problems are surmountable.There is some disagreement in the literature regarding the actual DOF in photomicrographic situations.

1982 ◽  
Vol 5 (1) ◽  
pp. 63-70
Author(s):  
R. Mark Bailey ◽  
H. R. Wenk

Two thin sections of macroscopic plagioclase spherulites of approximately 1 cm diameter found in a rhyolitic glass have been studied with the transmission electron microscope (TEM). Orientations of the thin sections were chosen to give views down and perpendicular to the major fiber axis. The crystalline fiber phase is high albite microtwinned on the (010) composition plane, elongated in the major growth direction, [001]. Fiber morphology is non-polygonal with an average fiber diameter of 2000 Å perpendicular to c*. Fibers are separated by a non-crystalline residuum layer of approximately constant thickness (300–500 Å). Microtwinning relationships, as well as selected area diffraction (SAD) patterns, reveal both crystallographic and non-crystallographic branching with the former unexpectedly dominant.


Author(s):  
J.R. Kremer ◽  
E.T. O'Toole ◽  
G.P. Wray ◽  
D.M. Mastronarde ◽  
S.J. Mitchell ◽  
...  

It is well known that irradiation of plastic sections in a conventional transmission electron microscope (cTEM) causes specimen thinning and distortion. Thinning has been observed in the cTEM using several embedding media, using methods such as shrinkage of ordered paracrystalline structures, and shrinkage of sections coated with colloidal gold markers. The total thinning observed in the cTEM (80kev) is 30-50% for thin sections of epon araldite, but similar data do not exist for the HVEM at 1000 kev. Here we describe beam induced thinning and shrinkage of 0.2um sections in the HVEM.Experiments were performed using 0.2um sections of EPOX 812/Araldite or LX112 with 15 nm and 30 nm gold particles affixed to either surface of the section. The sections were initially tilted to approximately 25° and irradiated with known dose rates. Micrographs were taken at different times between 0-20 minutes then the sections were tilted back to 0° for a reference micrograph.


Author(s):  
R. Freeman ◽  
G.W. Griffiths ◽  
A. V. Jones ◽  
K.R. Leonard

The scanning transmission electron microscope (STEM) has two distinct advantages over the conventional transmission electron microscope (CTEM) for the investigation of low contrast specimens such as unstained thin sections. These are the much higher collection efficiency for scattered electrons and the possibility of electronic enhancement of the image forming signal. The addition of an X-ray analysis system to STEM may also enable the identification of some of the elements contributing to the overall image contrast and to detect individual element concentrations in features of high contrast occurring in the specimens.Fresh tissue was fixed in 1-2.5% glutaraldehyde in PIPES buffer, quickly dehydrated in ethanol and embedded in epon. Thin (silver/grey) sections were collected on carbon coated copper or nylon grids and viewed in the STEM without further treatment. The microscope used was a Vacuum Generators HB5 STEM with field emission source operating at lOOkV with simultaneous bright field (BF) and dark field (DF) detection systems.


2002 ◽  
Vol 10 (5) ◽  
pp. 20-23
Author(s):  
Paul Beauregard

Recently, there was a suggestion on the MSA listserver about the use of osmium tetroxide (OsO4 and how to handle it. One suggestion was that ampoules be scored, placed in a glass jar, and the ampoule smashed to release the contents. This seemed like a very unsafe way to use osmium tetroxide or ruthenium tetroxide. The purpose of this article is to suggest a way to generate smaller amounts of these compounds in a safer manner than smashing ampoules and wondering about what to do with the unused portion after staining or storing. Another purpose is to discuss a new reaction indicator for mainly osmium tetroxide. The use of a reaction specific indicator was mandatory for judging the level or degree to which staining had proceeded in thin sections for the transmission electron microscope (TEM).


2007 ◽  
Vol 14 (1) ◽  
pp. 82-88 ◽  
Author(s):  
P.D. Nellist ◽  
E.C. Cosgriff ◽  
G. Behan ◽  
A.I. Kirkland

Aberration correction leads to reduced focal depth of field in the electron microscope. This reduced depth of field can be exploited to probe specific depths within a sample, a process known as optical sectioning. An electron microscope fitted with aberration correctors for both the pre- and postspecimen optics can be used in a confocal mode that provides improved depth resolution and selectivity over optical sectioning in the scanning transmission electron microscope (STEM). In this article we survey the coherent and incoherent imaging modes that are likely to be used in scanning confocal electron microscopy (SCEM) and provide simple expressions to describe the images that result. Calculations compare the depth response of SCEM to optical sectioning in the STEM. The depth resolution in a crystalline matrix is also explored by performing a Bloch wave calculation for the SCEM geometry in which the pre- and postspecimen optics are defocused away from their confocal conditions.


Author(s):  
R. A. Waugh ◽  
J. R. Sommer

Cardiac sarcoplasmic reticulum (SR) is a complex system of intracellular tubules that, due to their small size and juxtaposition to such electron-dense structures as mitochondria and myofibrils, are often inconspicuous in conventionally prepared electron microscopic material. This study reports a method with which the SR is selectively “stained” which facilitates visualizationwith the transmission electron microscope.


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