Site-Specific Incorporation of Nitroxide Spin-Labels into Internal Sites of the TAR RNA; Structure-Dependent Dynamics of RNA by EPR Spectroscopy

2001 ◽  
Vol 123 (7) ◽  
pp. 1527-1528 ◽  
Author(s):  
Thomas E. Edwards ◽  
Tamara M. Okonogi ◽  
Bruce H. Robinson ◽  
Snorri Th. Sigurdsson
2008 ◽  
Vol 52 (1) ◽  
pp. 147-148 ◽  
Author(s):  
M. Flaender ◽  
G. Sicoli ◽  
Th. Fontecave ◽  
G. Mathis ◽  
C. Saint-Pierre ◽  
...  

2007 ◽  
Vol 2 (8) ◽  
pp. 1954-1962 ◽  
Author(s):  
Thomas E Edwards ◽  
Snorri Th Sigurdsson

Author(s):  
Hannah Russell ◽  
Rachel Stewart ◽  
Christopher Prior ◽  
Vasily S. Oganesyan ◽  
Thembaninkosi G. Gaule ◽  
...  

AbstractIn the study of biological structures, pulse dipolar spectroscopy (PDS) is used to elucidate spin–spin distances at nanometre-scale by measuring dipole–dipole interactions between paramagnetic centres. The PDS methods of Double Electron Electron Resonance (DEER) and Relaxation Induced Dipolar Modulation Enhancement (RIDME) are employed, and their results compared, for the measurement of the dipolar coupling between nitroxide spin labels and copper-II (Cu(II)) paramagnetic centres within the copper amine oxidase from Arthrobacter globiformis (AGAO). The distance distribution results obtained indicate that two distinct distances can be measured, with the longer of these at c.a. 5 nm. Conditions for optimising the RIDME experiment such that it may outperform DEER for these long distances are discussed. Modelling methods are used to show that the distances obtained after data analysis are consistent with the structure of AGAO.


1987 ◽  
Vol 28 (5) ◽  
pp. 593-600 ◽  
Author(s):  
Wolfgang Grodd ◽  
H. Paajanen ◽  
U. G. Eriksson ◽  
D. Revel ◽  
F. Terrier ◽  
...  

2017 ◽  
Vol 121 (39) ◽  
pp. 9185-9195 ◽  
Author(s):  
Indra D. Sahu ◽  
Andrew F. Craig ◽  
Megan M. Dunagum ◽  
Robert M. McCarrick ◽  
Gary A. Lorigan

2019 ◽  
Vol 131 (38) ◽  
pp. 13405-13409 ◽  
Author(s):  
Olesya A. Krumkacheva ◽  
Ivan O. Timofeev ◽  
Larisa V. Politanskaya ◽  
Yuliya F. Polienko ◽  
Evgeny V. Tretyakov ◽  
...  

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