scholarly journals The genome sequence of Streptomyces rochei 7434AN4, which carries a linear chromosome and three characteristic linear plasmids

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Yosi Nindita ◽  
Zhisheng Cao ◽  
Amirudin Akhmad Fauzi ◽  
Aiko Teshima ◽  
Yuya Misaki ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Linear Plasmids ◽  
Linear Chromosome

Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids

2013 ◽  
Vol 168 (4) ◽  
pp. 739-740 ◽  
Author(s):  
Christian Rückert ◽  
Rafael Szczepanowski ◽  
Andreas Albersmeier ◽  
Alexander Goesmann ◽  
Dumitrita Iftime ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Linear Plasmids ◽  
Linear Chromosome ◽  
Streptomyces Collinus

scholarly journals Draft Genome Sequence of Agrobacterium tumefaciens Strain 1D1526

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Naxin Huo ◽  
Yong Gu ◽  
Kent F. McCue ◽  
Diaa Alabed ◽  
James G. Thomson
Keyword(s):  
Agrobacterium Tumefaciens ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Circular Chromosome ◽  
Linear Chromosome ◽  
Content Type

This work reports the draft genome sequence of Agrobacterium tumefaciens strain 1D1526. The assembled genome is composed of a 2,881,823-bp circular chromosome, a 2,235,711-bp linear chromosome, and a 44,582-bp unassembled contig.

scholarly journals Genome Sequence of Streptomyces sp. Strain RTd22, an Endophyte of the Mexican Sunflower

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Fernanda O. Chagas ◽  
Antonio C. Ruzzini ◽  
Larissa V. Bacha ◽  
Markyian Samborskyy ◽  
Raphael Conti ◽  
...  
Keyword(s):  
Natural Products ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Tithonia Diversifolia ◽  
Linear Chromosome ◽  
Streptomyces Sp ◽  
Endophytic Actinobacterium

We report here the complete genome sequence of Streptomyces sp. strain RTd22, an endophytic actinobacterium that was isolated from the roots of the Mexican sunflower Tithonia diversifolia . The bacterium’s 11.1-Mb linear chromosome is predicted to encode a large number of unknown natural products.

scholarly journals Draft Genome Sequence of Agrobacterium fabrum Strain 1D1104

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Naxin Huo ◽  
Yong Gu ◽  
Kent F. McCue ◽  
Diaa Alabed ◽  
James G. Thomson
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Circular Chromosome ◽  
Linear Chromosome ◽  
Content Type

This work reports the draft genome sequence of Agrobacterium fabrum strain 1D1104. The assembled genome is composed of a 2,774,783-bp circular chromosome, a 2,110,112-bp linear chromosome, an AT plasmid of 133,577 bp, and four unassembled contigs of 5,389,544 bp, 42,391 bp, 41,768 bp, and 35,476 bp.

scholarly journals Chromosome and Plasmids of the Tick-Borne Relapsing Fever Agent Borrelia hermsii

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Alan G. Barbour
Keyword(s):  
Next Generation Sequencing ◽  
Linear Plasmids ◽  
Relapsing Fever ◽  
Borrelia Hermsii ◽  
Linear Chromosome ◽  
Short Read ◽  
Zoonotic Pathogen ◽  
Long Read ◽  
Complete Sequences ◽  
Generation Sequencing

The zoonotic pathogen Borrelia hermsii bears its multiple paralogous genes for variable antigens on several linear plasmids. Application of combined long-read and short-read next-generation sequencing provided complete sequences for antigen-encoding plasmids as well as other linear and circular plasmids and the linear chromosome of the genome.

scholarly journals Complete Genome Sequence of Streptomyces sp. TN58, a Producer of Acyl Alpha-l-Rhamnopyranosides

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Soumaya Najah ◽  
Teik Min Chong ◽  
Claude Gerbaud ◽  
Kok-Gan Chan ◽  
Lotfi Mellouli ◽  
...  
Keyword(s):  
Natural Products ◽  
Soil Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Linear Chromosome ◽  
Streptomyces Sp ◽  
Specialized Metabolites

ABSTRACT Streptomyces sp. TN58, isolated from a Tunisian soil sample, produces several natural products, including acyl alpha-l-rhamnopyranosides. It possesses a 7.6-Mb linear chromosome. This is, to our knowledge, the first genome sequence of a microorganism known to produce acyl alpha-l-rhamnopyranosides, and it will be helpful to study the biosynthesis of these specialized metabolites.

scholarly journals Complete Genome Sequence of Streptomyces ambofaciens DSM 40697, a Paradigm for Genome Plasticity Studies

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Annabelle Thibessard ◽  
Pierre Leblond
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Islands ◽  
Inverted Repeats ◽  
Genome Plasticity ◽  
Linear Chromosome ◽  
Terminal Inverted Repeats ◽  
Streptomyces Ambofaciens ◽  
Integrative And Conjugative Element

The sequence of Streptomyces ambofaciens DSM 40697 was completely determined. The genome consists of an 8.1-Mbp linear chromosome with terminal inverted repeats of 210 kb. Genomic islands were identified, one of which corresponds to a new putative integrative and conjugative element (ICE) called pSAM3.

scholarly journals Chromosome and Linear Plasmid Sequences of a 2015 Human Isolate of the Tick-Borne Relapsing Fever Spirochete, Borrelia turicatae

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Luke C. Kingry ◽  
Dhwani Batra ◽  
Adam Replogle ◽  
Christopher Sexton ◽  
Lori Rowe ◽  
...  
Keyword(s):  
Human Isolate ◽  
Open Reading Frames ◽  
Linear Plasmid ◽  
Linear Plasmids ◽  
Relapsing Fever ◽  
Linear Chromosome ◽  
Plasmid Sequence ◽  
Reading Frames

The sequences of the complete linear chromosome and 7 linear plasmids of the relapsing fever spirochete Borrelia turicatae are presented in this report. The 925,547 bp of chromosome and 380,211 bp of plasmid sequence were predicted to contain a total of 1,131 open reading frames, with an average G+C content of 29.7%.

scholarly journals Complete Genome Sequence of Streptomyces lunaelactis MM109T, Isolated from Cave Moonmilk Deposits

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Aymeric Naômé ◽  
Marta Maciejewska ◽  
Magdalena Calusinska ◽  
Loïc Martinet ◽  
Sinaeda Anderssen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Hiseq ◽  
Linear Chromosome ◽  
Content Type ◽  
Oxford Nanopore

ABSTRACT Streptomyces lunaelactis MM109T is a ferroverdin A (anticholesterol) producer isolated from cave moonmilk deposits. The complete genome sequence of MM109T was obtained by combining Oxford Nanopore MinION and Illumina HiSeq and MiSeq technologies, revealing an 8.4-Mb linear chromosome and two plasmids, pSLUN1 (127,264 bp, linear) and pSLUN2 (46,827 bp, circular).

scholarly journals Genome Sequence of Borrelia garinii Strain NMJW1, Isolated from China

2012 ◽  
Vol 194 (23) ◽  
pp. 6660-6661 ◽  
Author(s):  
Baogui Jiang ◽  
Hongwu Yao ◽  
Yigang Tong ◽  
Xiaofeng Yang ◽  
Yong Huang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Northeastern China ◽  
Open Reading Frames ◽  
Ixodes Persulcatus ◽  
Borrelia Garinii ◽  
Linear Chromosome ◽  
Content Type ◽  
Reading Frames

ABSTRACTWe announce the draft genome sequence ofBorrelia gariniistrain NMJW1, isolated fromIxodes persulcatusin northeastern China. The 902,789-bp linear chromosome (28.4% GC content) contains 813 open reading frames, 33 tRNAs, and 4 complete rRNAs.

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