Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids

2013 ◽  
Vol 168 (4) ◽  
pp. 739-740 ◽  
Author(s):  
Christian Rückert ◽  
Rafael Szczepanowski ◽  
Andreas Albersmeier ◽  
Alexander Goesmann ◽  
Dumitrita Iftime ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Linear Plasmids ◽  
Linear Chromosome ◽  
Streptomyces Collinus

scholarly journals Genome Sequence of Streptomyces sp. Strain RTd22, an Endophyte of the Mexican Sunflower

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Fernanda O. Chagas ◽  
Antonio C. Ruzzini ◽  
Larissa V. Bacha ◽  
Markyian Samborskyy ◽  
Raphael Conti ◽  
...  
Keyword(s):  
Natural Products ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Tithonia Diversifolia ◽  
Linear Chromosome ◽  
Streptomyces Sp ◽  
Endophytic Actinobacterium

We report here the complete genome sequence of Streptomyces sp. strain RTd22, an endophytic actinobacterium that was isolated from the roots of the Mexican sunflower Tithonia diversifolia . The bacterium’s 11.1-Mb linear chromosome is predicted to encode a large number of unknown natural products.

scholarly journals Complete Genome Sequence of Streptomyces sp. TN58, a Producer of Acyl Alpha-l-Rhamnopyranosides

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Soumaya Najah ◽  
Teik Min Chong ◽  
Claude Gerbaud ◽  
Kok-Gan Chan ◽  
Lotfi Mellouli ◽  
...  
Keyword(s):  
Natural Products ◽  
Soil Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Linear Chromosome ◽  
Streptomyces Sp ◽  
Specialized Metabolites

ABSTRACT Streptomyces sp. TN58, isolated from a Tunisian soil sample, produces several natural products, including acyl alpha-l-rhamnopyranosides. It possesses a 7.6-Mb linear chromosome. This is, to our knowledge, the first genome sequence of a microorganism known to produce acyl alpha-l-rhamnopyranosides, and it will be helpful to study the biosynthesis of these specialized metabolites.

scholarly journals Complete Genome Sequence of Streptomyces ambofaciens DSM 40697, a Paradigm for Genome Plasticity Studies

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Annabelle Thibessard ◽  
Pierre Leblond
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Islands ◽  
Inverted Repeats ◽  
Genome Plasticity ◽  
Linear Chromosome ◽  
Terminal Inverted Repeats ◽  
Streptomyces Ambofaciens ◽  
Integrative And Conjugative Element

The sequence of Streptomyces ambofaciens DSM 40697 was completely determined. The genome consists of an 8.1-Mbp linear chromosome with terminal inverted repeats of 210 kb. Genomic islands were identified, one of which corresponds to a new putative integrative and conjugative element (ICE) called pSAM3.

scholarly journals Complete Genome Sequence of Streptomyces lunaelactis MM109T, Isolated from Cave Moonmilk Deposits

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Aymeric Naômé ◽  
Marta Maciejewska ◽  
Magdalena Calusinska ◽  
Loïc Martinet ◽  
Sinaeda Anderssen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Hiseq ◽  
Linear Chromosome ◽  
Content Type ◽  
Oxford Nanopore

ABSTRACT Streptomyces lunaelactis MM109T is a ferroverdin A (anticholesterol) producer isolated from cave moonmilk deposits. The complete genome sequence of MM109T was obtained by combining Oxford Nanopore MinION and Illumina HiSeq and MiSeq technologies, revealing an 8.4-Mb linear chromosome and two plasmids, pSLUN1 (127,264 bp, linear) and pSLUN2 (46,827 bp, circular).

scholarly journals Complete Genome Sequence of Agrobacterium fabrum Strain 1D159

2019 ◽  
Vol 8 (19) ◽  
Author(s):  
Naxin Huo ◽  
Yong Gu ◽  
Kent F. McCue ◽  
Diaa Alabed ◽  
James G. Thomson
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Virulence Plasmid ◽  
Circular Chromosome ◽  
Linear Chromosome ◽  
Content Type ◽  
Atcc Strain

This work reports the draft genome sequence of Agrobacterium fabrum strain 1D159 (also known as ATCC strain 27912). The assembled genome is composed of a 2,861,352-bp circular chromosome, a 2,058,040-bp linear chromosome, a 519,735-bp AT plasmid, and the 223,394-bp Ti virulence plasmid.

scholarly journals Complete Genome Sequence of Streptomyces clavuligerus F613-1, an Industrial Producer of Clavulanic Acid

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Guangxiang Cao ◽  
Chuanqing Zhong ◽  
Gongli Zong ◽  
Jiafang Fu ◽  
Zhong Liu ◽  
...  
Keyword(s):  
Clavulanic Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Acid Production ◽  
Streptomyces Clavuligerus ◽  
Linear Plasmid ◽  
High Yield ◽  
Industrial Strain ◽  
Linear Chromosome

Streptomyces clavuligerus strain F613-1 is an industrial strain with high-yield clavulanic acid production. In this study, the complete genome sequence of S. clavuligerus strain F613-1 was determined, including one linear chromosome and one linear plasmid, carrying numerous sets of genes involving in the biosynthesis of clavulanic acid.

scholarly journals Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “ Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Tobias Busche ◽  
Renata Novakova ◽  
Arwa Al'Dilaimi ◽  
Dagmar Homerova ◽  
Lubomira Feckova ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Linear Plasmid ◽  
Linear Chromosome ◽  
Content Type ◽  
Streptomyces Aureofaciens ◽  
Streptomyces Lavendulae

ABSTRACT Streptomyces lavendulae subsp. lavendulae CCM 3239 produces the angucycline antibiotic auricin and was thought to be the type strain of Streptomyces aureofaciens . We report the complete genome sequence of this strain, which consists of a linear chromosome and the linear plasmid pSA3239, and demonstrate it to be S. lavendulae subsp. lavendulae .

scholarly journals Complete Genome Sequence of a Polypropylene Glycol-Degrading Strain, Microbacterium sp. No. 7

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Yoshiyuki Ohtsubo ◽  
Yuji Nagata ◽  
Mitsuru Numata ◽  
Kieko Tsuchikane ◽  
Akira Hosoyama ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Polypropylene Glycol ◽  
Linear Plasmids ◽  
Circular Chromosome ◽  
Computational Tools ◽  
Resource Center ◽  
Metabolic Products ◽  
Institute Of Technology

Microbacterium (formerly Corynebacterium ) sp. No. 7 was isolated from activated sludge as a polypropylene glycol (PPG)-assimilating bacterial strain. Its oxidative PPG degradation has been proposed on the basis of PPG dehydrogenase activity and the metabolic products. Here, we report the complete genome sequence of Microbacterium sp. No. 7. The genome of the strain No. 7 is composed of a 4,599,046-bp circular chromosome and two linear plasmids. The whole finishing was conducted in silico with aids of the computational tools GenoFinisher and AceFileViewer. Strain No. 7 is available from the Biological Resource Center, National Institute of Technology and Evaluation (NITE) (Tokyo, Japan).

scholarly journals Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Sasha Langley ◽  
Thomas Eng ◽  
Kenneth H. Wan ◽  
Robin A. Herbert ◽  
Andrew P. Klein ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Circular Chromosome ◽  
Linear Chromosome ◽  
Thlaspi Arvense ◽  
Interaction Studies

Agrobacterium sp. strain 33MFTa1.1 was isolated for functional host-microbe interaction studies from the Thlaspi arvense root-associated microbiome. The complete genome is comprised of a circular chromosome of 2,771,937 bp, a linear chromosome of 2,068,443 bp, and a plasmid of 496,948 bp, with G+C contents of 59%, 59%, and 58%, respectively.

scholarly journals Complete Genome Sequence ofStreptomycessp. Strain CCM_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Richard M. Mariita ◽  
Srijak Bhatnagar ◽  
Kurt Hanselmann ◽  
Mohammad J. Hossain ◽  
Jonas Korlach ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Surface Soil ◽  
Linear Chromosome ◽  
Coding Sequences

Here, we present the complete genome sequence ofStreptomycessp. strain CCM_MD2014 (phylumActinobacteria), isolated from surface soil in Woods Hole, MA. Its single linear chromosome of 8,274,043 bp in length has a 72.13% G+C content and contains 6,948 coding sequences.

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