scholarly journals Post-transition state bifurcations induce dynamical detours in Pummerer-like reactions

2018 ◽  
Vol 9 (48) ◽  
pp. 8937-8945 ◽  
Author(s):  
Stephanie R. Hare ◽  
Ang Li ◽  
Dean J. Tantillo

A post-transition state bifurcation (PTSB) involved in a Pummerer-type rearrangement is characterized using density functional theory (DFT) calculations on potential energy stationary points and direct dynamics simulations.

2017 ◽  
Vol 4 (7) ◽  
pp. 1266-1271 ◽  
Author(s):  
Bin Wang ◽  
Tong Xu ◽  
Lei Zhu ◽  
Yu Lan ◽  
Jingdong Wang ◽  
...  

A novel bifunctional phase-transfer catalyst 1i was found to be highly efficient for the nitro-Mannich reaction of unactivated ketone-derived imines with the introduction of the protecting group 6-methyl-2-pyridylsulfonyl to the ketimines. Density functional theory (DFT) calculations are also performed to give the possible transition-state model.


2017 ◽  
Vol 19 (12) ◽  
pp. 8388-8399 ◽  
Author(s):  
F. Moradi ◽  
M. Darvish Ganji ◽  
Y. Sarrafi

Reactive molecular dynamic (MD) simulations and first-principle density functional theory (DFT) calculations were used to investigate the performance of SWCNT-based, sub-nanometer porous membranes for phenol remediation from wastewater.


2019 ◽  
Author(s):  
Yuxuan Ye ◽  
Ilia Kevlishvili ◽  
Sheng Feng ◽  
Peng Liu ◽  
Stephen L. Buchwald

<div><div><div><p>C3-substituted 1H-indazoles are useful and important substructures in many pharmaceuticals. Methods for direct C3- functionalization of indazoles are relatively rare, compared to reactions developed for the more nucleophilic N1 and N2 positions. Herein, we report a highly C3-selective allylation reaction of 1H-N-(benzoyloxy)indazoles using CuH catalysis. A variety of C3-allyl 1H-indazoles with quaternary stereocenters were efficiently prepared with high levels of enantioselectivity. Density functional theory (DFT) calculations suggest that the indazole addition to copper allyl complex proceeds through an enantioselectivity-determining six- membered Zimmerman-Traxler-type transition state. The enantioselectivity is governed both by the ligand-substrate steric interac- tions and the steric repulsions with the pseudoaxial substituent in the six-membered allylation transition state.</p></div></div></div>


2010 ◽  
Vol 09 (01) ◽  
pp. 249-263 ◽  
Author(s):  
VLADIMÍR LUKEŠ ◽  
ROLAND ŠOLC ◽  
MARIO BARBATTI ◽  
HANS LISCHKA ◽  
HARALD-FRIEDRICH KAUFFMANN

A systematic study of torsional potential curves in electronic ground state based on second-order Møller–Plesset energy (MP2), density functional theory (DFT), and Austin mode 1 (AM1) methods is presented for para-phenylenevinylene oligomers constructed from two to four aromatic rings. The semiempirical AM1 approach gives the correct location of potential energy minima in comparison with the reference MP2 calculations and literature data. However, the semiempirical AM1 energy barriers at perpendicular orientation are ca. 30% smaller than the MP2 ones. The DFT calculations indicate optimal planar structures and the barriers are three times higher than MP2 values. Excited-state potential energy curves evaluated from vertical excitations at the time-dependent density functional theory (TD-DFT) and ab initio CI levels exhibit much steeper increase of values in the vicinity of perpendicular orientation than in the semiempirical Zerner's intermediate neglect of differential overlap (ZINDO) and ab initio RI-CC2 cases. The effects of vibrational motion of phenylene rings on the torsional broadening of absorption spectra were estimated from semi-classical molecular dynamics simulations and harmonic oscillator sampling. The simulated spectra agree well with the experiment and allow estimating the conformer distribution of the molecules.


2019 ◽  
Author(s):  
Yuxuan Ye ◽  
Ilia Kevlishvili ◽  
Sheng Feng ◽  
Peng Liu ◽  
Stephen L. Buchwald

<div><div><div><p>C3-substituted 1H-indazoles are useful and important substructures in many pharmaceuticals. Methods for direct C3- functionalization of indazoles are relatively rare, compared to reactions developed for the more nucleophilic N1 and N2 positions. Herein, we report a highly C3-selective allylation reaction of 1H-N-(benzoyloxy)indazoles using CuH catalysis. A variety of C3-allyl 1H-indazoles with quaternary stereocenters were efficiently prepared with high levels of enantioselectivity. Density functional theory (DFT) calculations suggest that the indazole addition to copper allyl complex proceeds through an enantioselectivity-determining six- membered Zimmerman-Traxler-type transition state. The enantioselectivity is governed both by the ligand-substrate steric interac- tions and the steric repulsions with the pseudoaxial substituent in the six-membered allylation transition state.</p></div></div></div>


2021 ◽  
Author(s):  
Xinpeng Zhao ◽  
Zhimin Zhou ◽  
hu luo ◽  
Yanfei Zhang ◽  
Wang Liu ◽  
...  

Combined experiments and density functional theory (DFT) calculations provided insights into the role of the environment-friendly γ-valerolactone (GVL) as a solvent in the hydrothermal conversion of glucose into lactic acid...


Author(s):  
Lijuan Meng ◽  
Jinlian Lu ◽  
Yujie Bai ◽  
Lili Liu ◽  
Tang Jingyi ◽  
...  

Understanding the fundamentals of chemical vapor deposition bilayer graphene growth is crucial for its synthesis. By employing density functional theory calculations and classical molecular dynamics simulations, we have investigated the...


Author(s):  
Hanlin Gan ◽  
Liang Peng ◽  
Feng Long Gu

The mechanism of the Cu(i)-catalyzed domino reaction furnishing 1-aryl-1,2,3-triazole assisted by CuI and 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) is explored with density functional theory (DFT) calculations.


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