On the preferences of five-membered chelate rings in coordination chemistry: insights from the Cambridge Structural Database and theoretical calculations

2019 ◽  
Vol 48 (17) ◽  
pp. 5476-5490 ◽  
Author(s):  
Maryam Bazargan ◽  
Masoud Mirzaei ◽  
Antonio Franconetti ◽  
Antonio Frontera

We illustrate, combining experimental and theoretical results, that the five-membered chelate ring is able to adapt itself to a great variety of metal ions.

CrystEngComm ◽  
2015 ◽  
Vol 17 (17) ◽  
pp. 3354-3365 ◽  
Author(s):  
Marçal Capdevila-Cortada ◽  
Juan J. Novoa

The properties of C–Br⋯Br–C interactions have been determined by doing MP2 theoretical calculations on model dimers and on dimers taken from the Cambridge Structural Database (presenting Br⋯Br distances within the 3.0 to 4.5 Å range).


2020 ◽  
Vol 53 (6) ◽  
pp. 1593-1602
Author(s):  
Massimo Moret

This paper describes a laboratory course that introduces basic crystallographic data analysis to chemistry students encountering for the first time the world of crystals and crystal structures. The aim of the course is to provide students with direct contact with crystal structures and hands-on experience in structure analysis. To this end, a set of appropriately simple inorganic molecular structures was selected, consisting of salts of hexaaqua metal ions with organic counter-ions. By exploiting the crystallographic tools available in the Cambridge Structural Database program Mercury, students learn how to visualize and analyse a set of atomic coordinates. In this way they learn how to extract bonding and structural information concerning intramolecular interactions in both salt components. Intermolecular interactions are next analysed by looking closely at supramolecular motifs and packing patterns generated by hydrogen bonds. This pragmatic approach turned out to be effective and extremely useful for summarizing many chemical concepts learned by students during a bachelor degree course in chemistry. The experience provides at the same time some basic capabilities for properly managing crystal structure analysis.


1987 ◽  
Vol 40 (5) ◽  
pp. 829 ◽  
Author(s):  
NF Curtis ◽  
GJ Gainsford ◽  
P Osvath ◽  
DC Weatherburn

The structures of the compounds chloro (1,4,7,10,14-pentaazacycloheptadecane) cobalt(III) bromide chloride hydrate, [Co( chad )Cl] ( Br0.33Cl1.67)H2O(1) and bromo (1,4,7,11,15-pentaazacyclooctadecane) cobalt(III) bromide, [Co( coad )Br]Br2(2),have been determined by X-ray diffractometry. [Compound (1) orthorhombic, space group P bac, a 1208.5, b 2305.5, c 1318.9 pm, Z 8, R 0.056, Rw 0.071 for 1943 reflections. Compound (2), triclinic, space group P1, a 930.8, b 953.5, c 1120.3pm, α 84.60,β 398.82, γ 105.26�, Z 2, R 0.045, RW0.054 for 4821 reflections.] The compounds have structures with two ( chad ) or three ( coad ) six-membered chelate rings in the equatorial (N4) plane, but with different configurations of the chiral nitrogen centres ; chad : 1SR , 4SR, 7RS, 10RS, that is, with only the NH group at the junction of the two six-membered chelate rings on the same side of the N4 plane as the axial nitrogen; coad : 1 RS, 7SR, 11 SR, 15RS, that is, with NH groups of the central six-membered chelate ring on the same side of the N4 plane as the axial nitrogen, and the others on the opposite side. The chad compound has regular octahedral geometry, with one chair and one boat conformation six-membered chelate ring. The coad compound has distorted octahedral geometry, with long Co-N distances in the N4 plane, attributed to intra-ligand interactions.


2020 ◽  
Vol 22 (22) ◽  
pp. 12757-12765
Author(s):  
Bartomeu Galmés ◽  
Jaume Adrover ◽  
Giancarlo Terraneo ◽  
Antonio Frontera ◽  
Giuseppe Resnati

A search in the Cambridge Structural Database and theoretical calculations (UPBE0-D3/def2-TZVP level of theory) show the existence and relevance of substituent effects on the strength of radical⋯radical chalcogen bonding interactions.


2010 ◽  
Vol 39 (27) ◽  
pp. 6302 ◽  
Author(s):  
Adriana Esparza-Ruiz ◽  
Guadalupe González-Gómez ◽  
Edgar Mijangos ◽  
Adrián Peña-Hueso ◽  
Horacio López-Sandoval ◽  
...  

2019 ◽  
Vol 19 (7) ◽  
pp. 3989-3997 ◽  
Author(s):  
Rafel Prohens ◽  
Dafne de Sande ◽  
Mercè Font-Bardia ◽  
Antonio Franconetti ◽  
José F. González ◽  
...  

2020 ◽  
Vol 0 (9) ◽  
pp. 16-23
Author(s):  
A. L. Vorontsov ◽  
◽  
I. A. Nikiforov ◽  

The results of an experimental check of the obtained theoretical formulae allowing us to determine the most important parameters of extrusion cartridges with a counterpunch for different hollow radiuses and bottom-most part thicknesses are presented. Characteristics of used tools, geometric parameters of extrusion experiments, strength characteristics of deformed materials and lubricants are described in detail. Both strain-hardening material and strain-unhardening material were studied. Methodology of the theoretical calculations is demonstrated in detail. High accuracy of the obtained design formulae was confirmed.


2008 ◽  
Vol 59 (11) ◽  
Author(s):  
Mircea Braban ◽  
Ionel Haiduc

The paper describes the solid state structure of a compound of composition [Cu(bipy)3][Cu(bipy)(ala) (ClO4)2]ClO4, in which both the cation and anion are octahedral complex species with copper(II) as coordination center. The cation contains three chelate rings formed by bipy; the anion contains in the quatorial plane a CuONC2 chelate ring formed by the alaninato ligand and a CuN2C2 chelate ring formed by bipy, with two monodentate perchorato ligands in axial positions completing the six-coordination. In the crystal p-p stackings lead to a supramolecular self-assembled structure.


1990 ◽  
Vol 55 (6) ◽  
pp. 1427-1434 ◽  
Author(s):  
František Pavelčík ◽  
Eva Luptáková

The conformational surface of the Co(en) chelate ring was studied by the method of structural correlation. The reduction of dimensionality of the conformation problem was achieved by employing the pseudorotation concept. The empirical potential surface was obtained by statistical treatment of 743 independent conformations from the Cambridge Structural Database. The theoretical potential surface was obtained by molecular mechanics. The minimal-energy conformation is gauche with the Co atom on the two-fold axis. Conformational flexibility also includes an envelope conformation with the N atom bent out of the plane. The transition between the mirror-image symmetrical conformations can occur by a pseudorotation pathway and is accompanied by increased planarity of the ring. The transition state is an envelope conformation with an out-plane Co atom.


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