Detection of respiratory viruses and Legionella spp. by real-time polymerase chain reaction in patients with community acquired pneumonia

2009 ◽  
Vol 41 (1) ◽  
pp. 45-50 ◽  
Author(s):  
Bram M.W. Diederen ◽  
Menno M. Van Der Eerden ◽  
Fer Vlaspolder ◽  
Wim G. Boersma ◽  
Jan A.J.W. Kluytmans ◽  
...  
2020 ◽  
Vol 2020 ◽  
pp. 1-7
Author(s):  
Hao Zhang ◽  
Yinling Han ◽  
Zhangchu Jin ◽  
Yinghua Ying ◽  
Fen Lan ◽  
...  

Background. Nonresponding pneumonia is responsible for the most mortality of community-acquired pneumonia (CAP). However, thus far, it is not clear whether viral infection plays an important role in the etiology of nonresponding CAP and whether there is a significant difference in the clinical characteristics between viral and nonviral nonresponding CAP. Methods. From 2016 to 2019, nonresponding CAP patients were retrospectively enrolled in our study. All patients received bronchoalveolar lavage (BAL) and virus detection in BAL fluid by multiplex real-time polymerase chain reaction (PCR), and clinical, laboratory, and radiographic data were collected. Results. A total of 43 patients were included. The median age was 62 years, and 65.1% of patients were male. Overall, 20 patients (46.5%) were identified with viral infection. Of these viruses, influenza virus (n = 8) and adenovirus (n = 7) were more frequently detected, and others included herpes simplex virus, human enterovirus, cytomegalovirus, human coronavirus 229E, rhinovirus, and parainfluenza virus. Compared with nonviral nonresponding CAP, only ground-glass opacity combined with consolidation was a more common imaging manifestation in viral nonresponding CAP. However, no obvious differences were found in clinical and laboratory findings between the presence and the absence of viral infections. Conclusions. Viral infections were particularly frequent in adults with nonresponding CAP. The ground-glass opacity combined with consolidation was a specific imaging manifestation for viral nonresponding CAP, while the clinical and laboratory data showed no obvious differences between viral and nonviral nonresponding CAP.


2019 ◽  
Vol 22 (2) ◽  
pp. 35
Author(s):  
Jean Damascene Uwizeyimana ◽  
Min Kyung Kim ◽  
Daewon Kim ◽  
Jung-Hyun Byun ◽  
Dongeun Yong

2005 ◽  
Vol 41 (3) ◽  
pp. 345-351 ◽  
Author(s):  
K. E. Templeton ◽  
S. A. Scheltinga ◽  
W. C. J. F. M. van den Eeden ◽  
W. A. Graffelman ◽  
P. J. van den Broek ◽  
...  

Author(s):  
Lucy A Desmond ◽  
Melanie A Lloyd ◽  
Shelley A Ryan ◽  
Edward D Janus ◽  
Harin A Karunajeewa

Background Community-Acquired Pneumonia (CAP) is one of the highest health burden conditions in Australia. Disease notifications and other data from routine diagnosis suffers from selection bias that may misrepresent the true contribution of various aetiological agents. However existing Australian prospective studies of CAP aetiology have either under-represented elderly patients, not utilised Polymerase Chain Reaction (PCR) diagnostics or been limited to winter months. We therefore sought to re-evaluate CAP aetiology by systematically applying multiplex PCR in a representative cohort of mostly elderly patients hospitalised in Melbourne during non-winter months and compare diagnostic results with those obtained under usual conditions of care. Methods Seventy two CAP inpatients were prospectively enrolled over 2 ten-week blocks during non-winter months in Melbourne in 2016-17. Nasopharyngeal and oropharyngeal swabs were obtained at admission and analysed by multiplex-PCR for 7 respiratory viruses and 5 atypical bacteria. Results Median age was 74 (interquartile range 67-80) years, with 38 (52.8%) males and 34 (47.2%) females. PCR was positive in 24 (33.3%), including 12 Picornavirus (50.5% of those with a virus), 4 RSV (16.7%) and 4 influenza A (16.7%). CAP-Sym questionnaire responses were similar in those with and without viral infections. Most (80%) pathogens detected by the study, including all 8 cases of influenza and RSV, were not otherwise detected by treating clinicians during hospital admission. Conclusion One third of patients admitted with CAP during non-winter months had PCR-detectable respiratory viral infections, including many cases of influenza and RSV that were missed by existing routine clinical diagnostic processes. Keywords: Lower Respiratory Tract Infection (LRTI), Community-Acquired Pneumonia (CAP) Polymerase Chain Reaction (PCR), Influenza, Respiratory Syncytial Virus


2014 ◽  
Vol 109 (6) ◽  
pp. 716-721 ◽  
Author(s):  
Ronaldo Bragança Martins Júnior ◽  
Sharon Carney ◽  
Daniel Goldemberg ◽  
Lucas Bonine ◽  
Liliana Cruz Spano ◽  
...  

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